Functional Module

Module Search Results

CFinderAmo0827's details annotation

Protein:
Green color--interaction proteins ################################ ################################ ################################
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein
Blue--proteins own interaction and negative co-expression relationship with target protein

Module annotation (GSEA enrichment result)

Function Annotation	FDR	Category
gene silencing by siRNA-directed DNA methylation	0.00013	GO:0080188
chloroplast-nucleus signaling pathway	0.0012	GO:0010019
mitochondria-nucleus signaling pathway	0.0023	GO:0031930
RNA ligase (ATP) activity	0.0047	GO:0003972
2',3'-cyclic-nucleotide 3'-phosphodiesterase activity	0.0047	GO:0004113
detection of visible light	0.0065	GO:0009584
tRNA splicing, via endonucleolytic cleavage and ligation	0.0065	GO:0006388
megagametogenesis	0.012	GO:0009561
phosphorelay sensor kinase activity	0.012	GO:0000155
endonuclease activity	0.012	GO:0004519
spindle	0.027	GO:0005819
chloroplast	0.029	GO:0009507
Cullin	0.01	Ubiquitin

Module member annotation

Gene ID	Annotation	Orthologue in Arabidopsis
Am04G023820.1	XH/XS domain-containing protein	AT3G48670
Am04G023940.1	XH/XS domain-containing protein	AT3G48670
Am05G012420.1	Pentatricopeptide repeat (PPR-like) superfamily protein	AT1G09820
Am05G017470.1	RNAligase	AT1G07910
Am05G022620.1	anaphase-promoting complex/cyclosome 2	AT2G04660
Am06G016580.1	phytochrome E	AT4G18130
Am09G017800.1	pentatricopeptide (PPR) repeat-containing protein	AT5G12100