Gene detail

Detail information of Am09G024590.1 Annotation

Gene ID	Annotation
Am09G024590.1	heat shock protein 60-2

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am09G024590.1	mRNA	Chr09	79338378	79339422	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM09G024590.1
CAACATTTCAACATTTTATCCTTTGTTGTGAACTTATTACTATCATACCGTGTAGGGGAAAGAAAAAAGCCACAAGTGGCAAGAAAGTTGAAAATGAAGCCTGTTAGATTTAGTAACAGGCTCAAAAGTTCAACAAGCAACAAGCCCGTGATCCAAATGCTCCATTAGTCATTGAAGATGATGGTCCTCCTTTGAAGAGTTTGGATGAAATCATCAATAATCCGACACGGTGAATATGAAGAACTTCAAATGTTGTTTGTATTTTGTTTAGGAATGCTTGTATTTTGTTTTGGTGGTGTAATTTAAGAATGTTTAGAAGTGTAATTAGAAACTACCAAATTTTGTACTTTGTTAGCACTAGAAATGGCTAGACACTTATGCCACAAACTTCCACGTGTTTACTTTTGTTCCTTATTTTGGATATTGTTACTTTGGTTCATGTAACTAAATCATGCACTTTGTGAACCACCCTTAACCAATGGTCGGGGGTTCGATCCCCGCATTGGATACGAAGCAGCATTCAAACTCTGGGCCAGCTGTCCTGCCCCTCGAGGCACCTACAATGAGTGAGGGATTAGTCACTGCTGTCCGTGCGGTAGATACCCAGGTTTACCCAAAAACAAAATTATGCACTTTGTGAAGAATCAATGAAGCTCAAAGTTCAATTATGTTAATTATGAAGTACAATTCATGTAGTGCAATTCTGAGACGTTATCACAAGTTAATTTAATATCAGGCATAACGTCCAAATGAATCAATATTGTTAACCAATAATTTACAGTTTTGGTCCATACCTTTTCCATGTGTTTCATATTTTGGTCCTACTTTTTTCAAATGTTTCATGTTTTGGTTCCTACTTTTTTTCATATGTTTCCTGCTTAGGTCCCTACTTTTTTCAAATGTTTCGTCTTTTAGTCCCTACTTTTATTTAGTGTTCCCTCATTTAGTCTATGTTGTTGTGAAATGTTTCCAATCTCTCATGTACTTTTACCACATGGTCATTTTTTCGTAGTCAAAGGAAAATTTTGCATTAAACATCAAATTCACCCAGTGGAAAAAAGACATTTTATAACAGGAATTCATATCGGTTAAAAATGAGCTGATATTAAAAGTGAGGCGGTGGCAGTTTTGTAATTAAAATTATAATATTTACATCGGTTGTCACACGAACCGATATAGAAACACAATCTTTACATCTTTCATATCGGTTCCATTTCATAACCGTTATGGAAAACGCAAAAATTTAGGCTTCCATAACGGGTCACAAAACCACCCGTTATAGAAACGCAAAAATTTAGGCTTCGCTTCACATCTCTTCTATTCGCAAAAATTTAGGCTTCCCTTCACATCCCATATCGACCCTCATCTTCTTCCTCTCAAAATCGCACATAATCTCCTTCCTTATGAAAGTCTCGAATCAGACCAACCAAGGCGGCTTCCCAATCTTCTAATTCAAACGCGAATTCCGCTCCCTCACTCGAAGAACCACCATCGCCACAACCAAAAACCCTCTCGCTACGTCCATAGCACCACCGCAACACCACCACTGCAACCACAAATCCACGTAGTCGCTGTCACACTGATTACTATCGTTGGGAGTACCACGACAACGCCATAGATGTCATCACCACCACACCGCCGTTGCGAACACCGTGTCAACGTCGTCGCTAAGACCTTTCACGCCCCTGCTGTGAATAGCGTGTTTACGCCGTGGATTTGTGTTTATGCCTATCACTAGGTAGACTCTTCTTTAACAGCTCATTTGCTATTTTACTGGATTTGTGAATTTTAGGGTTACAAGATTGGGATTTGTGGTATTTTTTGGGGGTTTTGGAAAAAATGTCATGTAAAGGCTGTTCTGGAGCTATGACTAGGGTTTTGGAAAAAATGGAAGGTATTTCTTATACCTTGAGCAAACATCTCTACTATCAGATCCAATTAGTAATTGTGACAATGTAATATCTTAATGTTGATATTTTTTTCCTGTCTATATTATTATTCAATTTTAATTAATTACCAAACATTTTTGATTTTGAATGTGTTTCTGTTTGCTTAATTCAGAAACATTGCTTGAAGGATTTTAACCAAGGTGATGGATATAATATTTTGTTCTTGTATTGTTGTTTATACTTTATAGAATGCCAAGCATTGTCACTAAGTAAACGTGAAGCCATTTGAGTTTGTGAGTTATCTTATGCTATCATATATCCACCTTCTTGTGATTATAGTCTATCGTACCATAAAAGTTGGCACAGAACTTTCTTCTAAGGTCTTGCATGTGAAGCATTTCTTTCTGTTATGAATTGCTAGCAAATACGGTTTAGTAGTTTCATATCTCCTCAAATGTTGCATCTATTTCCTGGAAGTTAATTTGCTTCTATAGTTTTGGGAACTCCATCAAGTTTTTGCTATACCAACCAAGCACTCTCTTTCAGTACTGTATCAAACTAACAATTTTTTTGTTATATATGTACAGGTGTGGAATCATTTGACATTGATATGAAACAGCAGAAGGTAACTATGAAGGGAAATGTGAAGCCAGAACAAGTTTTTGAGACCGTTTCCAAAACTGGAAAGAAGACTGCCTTCTGGGTGGAGCCTGAAAACAAGCCCACCGAAAGCGTCGCCTCAACCGAGCCTGAAAACAAGCCTTTAGAAACTGCAACAGTTGCCTCTGAGGCTGATAACAAACCTTCATAAATTGCAGCAGTGACCACTGCTGAGGGTGATAACAAGGCTTTAGAAACTGCAATTGTGGTCTCAACTGAGCCTGAGAAGAAGCCTTCAGAAACTGCTACCATTGTTGCCTAAGACATTTGTGGATCCTATTTCTATTGGGTGTATGTAGATGACTAACTAGTGTTCTTAATGTTGCAGGTGACAATTTCTAAGGATGACACTGTTGTTCTTGATGGGGCAGGTGACAAGAAAGGGATTGAGGAAAGATGTGAACAGATTAGGTCAGCAATTGAAAATAGCACTTCTGATTATGACAAGGAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00118.27	Cpn60_TCP1	10	160	7.60E-35

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0042026	protein refolding	Biological Process
GO:0140662	ATP-dependent protein folding chaperone	Molecular Function
GO:0005739	mitochondrion	Cellular Component
GO:0005829	cytosol	Cellular Component
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR027410	TCP-1-like chaperonin intermediate domain superfamily
IPR027413	GroEL-like equatorial domain superfamily
IPR027409	GroEL-like apical domain superfamily
IPR002423	Chaperonin Cpn60/GroEL/TCP-1 family
IPR001844	Chaperonin Cpn60/GroEL
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)

trEMBL

trEMBL term	Description
A0AAQ3RJ31	_

SwissProt

SwissProt term	Description
CH62_MAIZE	Chaperonin CPN60-2, mitochondrial

KEGG

KO	Description	Enzyme
K04077	chaperonin GroEL	[EC: 5.6.1.7]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G33210	heat shock protein 60-2
Medicago sativa L.	MsG0880042581.01.T01	_
Oryza sativa L.	LOC_Os10g32550.1	T-complex protein, putative, expressed
Cucumis sativus L.	Csa007204	_
Glycyrrhiza uralensis Fisch.	Glyur002058s00032907.1	_
Codonopsis lanceolata	Cl_chr03_41440T	_
Arachis hypogaea L.	AH19G28790.1	Chaperonin CPN60-2, mitochondrial like

Expression pattern