Gene detail

Detail information of Am09G024220.1 Annotation

Gene ID	Annotation
Am09G024220.1	CDPK-related kinase 3

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am09G024220.1	mRNA	Chr09	78518804	78525893	-

Sequences

CDS:

>Am09G024220.1
ATGGGCCAGTGTTACGGGAAGACCATTCCCAGTGGAGACAACGACCATGACCCCAACACAACCACCATAATTGCCTCCTCTACCGACGCCGACGGCAATCGCTCCCCGACACCCTCTGCCGCCAACGGGTTTCCGTCGGTGAAGAATACGCCGGCACGGTCCTCCTCGCAAGCCAGCCCCTGGCCGAGCCCCTACCCTCATGGCGTGAATCCAAGTCCGTCGCCGGCAAGGGCATCGACGCCAAGGAGATTTTTCCGTCGTCCGTTTCCGCCTCCGTCTCCGGCGAAGCATATAAGGGCGTCTCTGGCGAAGAGGCTTGGGCAGACGAAGCCGAAGGAAGGGCCAATTCCGGAGGAGCGTGGAGTTGAAGCGGAGCAGTCGCTGGATAAGAGTTTTGGGTATAACAAGAATTTTGGAGCTAAGTATGAGTTGGGGAAGGAAGTGGGGAGAGGGCATTTTGGTCATACTTGCTCTGCTAGAGGAAAGAAGGGTGATCTCAAAGATCAACCTCTTGCTGTTAAAATCATTTCTAAGGCCAAGATGACCACAGCAATCGCCATCGAAGATGTTCGTAGAGAGGTGAAGCTATTGAAAGCTCTGTCTGGCCATAAGAATCTTGTCAAATTTCATGATGCTTGCGAGGATGCCAATAATGTGTACATAGTTATGGAATTGTGTGAAGGTGGAGAGCTTCTTGACCGAATTTTGTCAAGGGGAGGAAGGTATACAGAGGAGGATGCGAAAGTTATAGTTTTGCAGATTCTTAGTGTAGTTGCCTTTTGTCATCTTCAAGGTGTGGTGCATCGTGACCTAAAGCCTGAGAATTTCCTCTTCACTTCAAGAGGTGAAGATGCTGATATGAAGCTTATTGATTTTGGTCTGTCTGACTTCATCAGGCCAGAAGAACGGTTGAATGACATTGTTGGGAGTGCATATTATGTTGCACCTGAGGTCCTTCACCGATCTTATAGTGTGGAAGCGGATATATGGAGTATTGGTGTTATTTCATACATTTTATTGTGTGGTAGTCGACCATTCTGGGCACGGACAGAATCTGGTATCTTTCGTACAGTTCTCAGAGCAGATCCTAACTTTGATGATTTACCTTGGCCATCTGTATCTCCAGAGGCGAAGGACTTTGTTAAAAGGCTCCTAAACAAGGACTACAGGAAAAGAATGACTGCTGCTCAAGCTCTAACTCACCCTTGGTTGAGGGATGACAACCGTCCTGTCCCTTTGGATATATTAATTTATAAATTGGTGAAGTCTTATCTTCACGCGACACCATTCAAGCGTGCAGCAGTGAAGGCTCTTTCAAAAGCTTTGACAGAGGAGCAGTTGATGTATCTTAGTGCGCAATTCAGATTGTTGGAACCAAACCGAGATGGGCATGTCTCCCTTGACAATTTCAAAATGGCTCTTGCACGTCACGCAACTGATGCCATGAGGGAGGGGAGGGTTCTTGACATCATACACACGATGGAACCACTTGCCTATAGAAAGATGGATTTTGAAGAATTTTGTGCAGCTGCAACTAGCACATATCAACTGGAGGCACTTGATAGGTGGGACGATATTGCCAGCACCGCATTTGAGCATTTTGAGAGAGAAGGCAACCGTGTGATATCGATCGAAGAATTAGCAAGAGAGCTAAATCTTGGTCCTTCAGCATATTCAGTTCTCAGAGATTGGATAAGAAATACTGACGGAAAGCTTAGTTTACTTGGATATACAAAATTTTTGCATGGTGTGACTCTCCGGACTTCAGTCCCAAGACCTCGTCAGTCTTGA

Protein:

Promoter(3k):

>AM09G024220.1
ACAAAACCAGTTATTGAGAAACGAACTTTCTGTATTTGAACCGTTAAAATTTTTTCTGAACATTAAAGTACCCCAAAACACACTACTTACGCATAGTTTTAAAAACCGGCTCGACCCGGGAACCGGGGGGTAACCGAGCCGGTCAACCGTATGGATCAAATATGCAGCATACCGGTGAAAGCCGGTGTGACTCGGCCGGGTTTTGCAAAAACCGGTGAACCGGTAAACCGGTTTGACCCGGACTGGGTTGTGAATTTAAAAAAATTATTGTTTTTTATCAAAACAACGTCGTTTAATCTGTTTTTTTGCTCTTTTTCATCCTTTTCTTTTCCATTATTGCATTATTAGCAAAAATAAGTACAATATTTGTTGAGTACATATTAATTTGTATGATCTAAAATAGATTAATATTATGTATGAATAAATTTAAAAATATTAATAAATTAAGATATTAATTTTTATATTTTAGTAAATATAAAATAAACATAGTTATTAATTTTACAGGTACAAAATTTATATTATATACTCTTGAAAATTCGCGAAATAGAGACCGGGTCCGAGTCATGCGGTCCCGGTTTTGGTCATGCGGTTCAACTGTCGACCCCTCGGTCCGACCCTTGACCCAGTACCTTCACCGAGTCGGTCACCGATCCGAGTTTTAAAACACTTCTACTTTGGATTGGACTTTATGGATTTTGTCACGAAACTATTTTTTTCTACCAAACCGATTAAATTCATGTATTTGAACATCTAAAATTTTTTCGGGACCCTAAAGTACACTAAAACACACCGTTTAGCATCACATTCTACGTATTTTTGTCACAAAATTATTTTTTCTTTTCACCAAAACCGGCTATTGAGGAATAGACTTCACGATTTGGACATCTATAATTTTTTTTAGACTCTAAAGTATCTCAAAACACACGGCTTATCATAACACTTTACATTATTTTCTCAAAATTAATTGTTTTAGAGAATTATAATGTTACCGTAATAGCCCTACAATGTATAGTGAGTCATACTTATAATGATTGCATTTTTTTAGACTTAAAAAGCAAGTAAAAGTTAGTTATAAAAAAATAATAAAAGGGGAAACCATTTTGGCACCTAAAGTTGCATTCGTATTCAACTTAACCTTAAGATTTAAAGATACCTATATCTCCTTAGTGTTAGAGTTTAGTTTTTCTTAGAGCCGGCAAAATGGGCCGGGCCCGCCGGGCTGGGCCGGGTTAGCCCGAAAAATGGGAGGGCTTGGGCCGAAGGAATTGAGCCCGTTTTTATATTTCGGGTTTTTTAGCCCGGTCCGCAAAAGCCCGAGCCCGCGTCGGGCTAGCCCGACCGGGCCATGGGTAGCCCGCAAGCCCGTGATTCATAAAATGAAAAAAAAAGACACAGATTTGTGATGAAGAAGCTTAGTTCTTCATCACAGATCATGCTATTTGCTGATTTGTTTGCTTGTAGCATTGCAAGAGTACATAGATATTTGATATGATTGTGGAGACTAAATTTTTACTATATTCTTTAATGTCTACCATGTGATGGAGAGTGCACGACATGAAATATGGTTGGAATGTTATTTATAAAGAATGAGAAAACTGAAAGTGAGCTGGAGTATCCAACAAATTAAAACCATAATTTACTGAGTTATTTACTGAGAAATTTGTGTACAAAATTATCAACACATACAAGGACATGAGTTACTGTCTCATTGTACATTCCACATATAATCATTCAACTCGGGTTTTTTAGCCCGACCCTTAAAAGCCCGAGCCCGTAGTGGGCCGCCCGATATGGGTCGGGTAGCCCGTTTTGCACAGCTCTGGTTTTTCTCTATTTTCATTTTATTTCTCATGAGTAAGTGTTTTTCTTCGTATCATATCAATTTTCGTTAAAATAGAGGTCAATGAATTGACAACTTTTCATGAATGGATGTTATTTATCTAAAAAGTAAATGAAAGTTATTATTCATAAATGAAAAAACACGAAGACTTAAATTCATTATCATTATTATCAATCATGATACTCTTATTTCTTTTTTTATAAACCAGGGTAATCACCGCGAACGCAGTGACTAATTCCCTCGCTGGATTGGAGGCACCTCGAAGGGTGAGACAGATGGTCCAGGAATTTAAAGCTGCTCCATACCCAATGCGAGAATTGAACCCTCGACACTTGGTTAATAGAGGATGAGCTCCAACCGCTCGACGACACCTCTCGGTTCATGATACTCTTATTTCTATACCTAATACCTAATTTATTTTAATTTAATCCCACCCATGTACAAAATTGTGAATTATTCCTTCTAGCCTCAAATATTGTTTTTTGATTATATTATATTTCAGACAGGAAGAAGTAAGCATAAGCAAGGACTCCTAAAAAAAGTAACAACAAATGGATTCCAAATCCATCCCCCACAGAATCCCTCAATCTTCGAAGCTTTGGACTATTTGTCAGCTTCACTTGTAATGCCTAGCTTCCGATCTAACCACTACCCTAAATCCCAATCTAATTCTTTAATCTCTCTCCACCCCTAACCACATTCATGTCCCACCACCAAACACATCACACATAAGACATACAAAACAAAAAAATAGTAGAAAAAGACAAAAACGAAAAGTAGATAGAAAATAACCAACGGCCCTGATTAACTCAAAGTGCAAAGATCAACCGTCCTCAGCGTTTTACACACCTAGACTGCGAAGCTGGTTATAATTCCCCATATTCACTTACTGCACACCCATTTTGTTTTGTATTTGTTTGTTACTTGTAACACTAGTGAACAGACCTTGTCTGCTTTACTTTTTCTTTTGTTCTTCGTGTGGGTTTTTCTGTCTCTGTCTCTCTATCTCTCTCCTAAAAAACTCTACCTGACTCAAAATTCTCTGGTTTTATCGTTTTCCCTTAGCAGATCTCACTGCTTTACCGAGGGGAAACGGATCGGAGTAGAAGCTTCTGGAATGTGCGGAGTTTGATCAAACAAAGCTTGTTGCGTTAGTGACC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	142	404	5.70E-69
PF07714.20	PK_Tyr_Ser-Thr	143	397	1.40E-33
PF06293.17	Kdo	218	295	1.40E-06

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:4.2.1:CAMK_CDPK

Gene Ontology

GO term	Description	Category
GO:0010150	leaf senescence	Biological Process
GO:0071215	cellular response to abscisic acid stimulus	Biological Process
GO:0044042	glucan metabolic process	Biological Process
GO:0016762	xyloglucan:xyloglucosyl transferase activity	Molecular Function
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR011992	EF-hand domain pair
IPR002048	EF-hand domain

trEMBL

trEMBL term	Description
A0A8B8L105	_

SwissProt

SwissProt term	Description
CAMK3_ARATH	CDPK-related kinase 3

KEGG

KO	Description	Enzyme
K13412	calcium-dependent protein kinase	[EC: 2.7.11.1]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G46700	CDPK-related kinase 3
Medicago sativa L.	MsG0780041787.01.T01	_
Oryza sativa L.	LOC_Os06g50030.1	CAMK_CAMK_like.30 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
Cucumis sativus L.	Csa009254	_
Glycyrrhiza uralensis Fisch.	Glyur000369s00020550.1	_
Codonopsis lanceolata	Cl_chr07_07360T	_
Arachis hypogaea L.	AH16G14090.2	CDPK-related kinase 3 like

Expression pattern