| Gene ID | Annotation |
|---|---|
| Am09G023830.1 | Ubiquitin-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am09G023830.1 | mRNA | Chr09 | 77769544 | 77771833 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13019.9 | Sde2_N_Ubi | 10 | 158 | 4.30E-32 |
| PF13297.9 | SDE2_2C | 405 | 469 | 1.00E-25 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0003677 | DNA binding | Molecular Function |
| GO:0051301 | cell division | Biological Process |
| GO:0006260 | DNA replication | Biological Process |
| GO:0042254 | ribosome biogenesis | Biological Process |
| GO:0005737 | cytoplasm | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR029071 | Ubiquitin-like domain superfamily |
| IPR025086 | SDE2-like, C-terminal domain |
| IPR024974 | Sde2, N-terminal ubiquitin domain |
| trEMBL term | Description |
|---|---|
| A0AAN9LL60 | _ |
| SwissProt term | Description |
|---|---|
| SDE2_XENLA | Splicing regulator SDE2 |
| KO | Description | Enzyme |
|---|---|---|
| K25059 | replication stress response regulator SDE2 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT4G01000 | Ubiquitin-like superfamily protein |
| Medicago sativa L. | MsG0780041754.01.T01 | _ |
| Oryza sativa L. | LOC_Os01g48930.1 | splicing factor-related, putative, expressed |
| Cucumis sativus L. | Csa008395 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000121s00009720.1 | _ |
| Codonopsis lanceolata | Cl_chr05_03870T | _ |
| Arachis hypogaea L. | AH16G13450.1 | Protein SDE2 homolog like |