Detail information of Am09G022730.1 Annotation
Gene IDAnnotation
Am09G022730.1 exoribonuclease 4
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am09G022730.1mRNAChr097560311275613837+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF17846.4XRN_M3304222.80E-158
PF17846.4XRN_M4387242.80E-158
PF03159.21XRN_N12576.30E-97
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0006397mRNA processingBiological Process
GO:0005634nucleusCellular Component
GO:0008270zinc ion bindingMolecular Function
GO:0000956nuclear-transcribed mRNA catabolic processBiological Process
GO:0003676nucleic acid bindingMolecular Function

InterPro
InterPro termDescription
IPR036875Zinc finger, CCHC-type superfamily
IPR001878Zinc finger, CCHC-type
IPR004859Xrn1, N-terminal
IPR041412Xrn1, helical domain
IPR0171515'-3' exoribonuclease type 2
IPR0270735'-3' exoribonuclease

trEMBL
trEMBL termDescription
A0A1S2XUJ6 _

SwissProt
SwissProt termDescription
XRN4_ARATH5'-3' exoribonuclease 4

KEGG
KODescriptionEnzyme
K205535'-3' exoribonuclease 4[EC: 3.1.13.-]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT1G54490 exoribonuclease 4
Medicago sativa L.MsG0780041619.01.T01 _
Oryza sativa L.LOC_Os03g58060.1XRN 5'-3' exonuclease N-terminus domain containing protein, expressed
Cucumis sativus L.Csa006779 _
Glycyrrhiza uralensis Fisch.Glyur000001s00000180.1 _
Codonopsis lanceolataCl_chr05_10380T _
Arachis hypogaea L.AH06G08070.15'-3' exoribonuclease 4 like

Expression pattern