Gene detail

Detail information of Am09G020140.1 Annotation

Gene ID	Annotation
Am09G020140.1	myb domain protein 12

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am09G020140.1	mRNA	Chr09	69879596	69881757	-

Sequences

CDS:

>Am09G020140.1
ATGGGAAGGGCTCCTTGTTGTGAGAAAGTGGGTTTGAAGAAGGGAAGGTGGACAGCAGAGGAAGATGAAATTTTGACCAAGTATATTCAAGCCAATGGGGAAGGATCTTGGAGGTCATTGCCAAAAAATGCAGGATTGCTTAGATGTGGAAAGAGTTGCAGATTAAGATGGTTTAACTATTTGAGAGCTGGTCTCAAAAGGGGGAATATTTCTGTTGAAGAGGAAAGTATCATTGTCAAGTTGCATGCTTCTCTTGGCAACAGGTGGTCTGTAATAGCAGGTCACTTGCCAGGTAGAACAGACAACGAGATAAAAAACCACTGGAACTCTCATTTGAGCAGAAAAATTTACACCTTCCGAGGGACAAAAATTACTAATGAGATTCCCTTGCAAGAAGGAATCGTGGACACACCTCCCAAGCGCAAAGGTGGCAGAACCAGCCGCTGGGCCACGAAGAAGAACAAGAGCTATGGCATTGAGACCCCAAAACAACGCAAAGTTACAGTTACACTAGAGACCGAGAAGAATGGCTCATGTTCTAGTAGTTCCTATCATCACCATCATCATGATAGAGATGAGTTGCAGTTACGGTGCCTTGACGGTGAGAAAAAAACTACTAGTAATGACGATGAAGACATGTTATTGGGACCATATGCAGAGCTTAATAATAATAATAATAATAATGGCGGTTGTTGTGAGGTGTTGGATTTTAATGACATCATGGACACTTGCATGCTGAAAGAAACAGGTGGGGTTTTGAGTAACATTGGTGAATTAAAAGAAAGAGAAAGCAATGATGTGGTGGTGATTAATGAAAGAGGGGACACGGTAACTAATTCGTTGGAAACAGGGGACCCAGAAGAGAACCACGGCTTCAATGGAGGGGAGATACACTATTCTTCCTCTTCTATGGCTTCTTCTGGTTTAGATGATAGTAACTCTTGGGATTGGGAGAGTGTCTTGCAGTTGAATCATAAAGGACAGTCGATGTCTTGGGAGCAAAGTGAGAAATTGCTTACTTGGCTTTGGAATGATGATGATGACTGGGAAAAGAATTTTCAAAGATTTGACCCTCAGGAACAAAATTCTATGGTTTCTTGGTTTTCCTCTTGA

Protein:

Promoter(3k):

>AM09G020140.1
GAAATCCTATGGTTTGGGTTTCAGACATTCTCGGGGCTAAGGCAACCAATAGTCATCATTCTACAACTCTAAAAACATAGTCAGAAACTAGACGTCCTTAGCTTTTCGTAGATGGGTCGTTTACTAAATTTCGTGGCCGTTTGATAGGTTAAATAAATTCTCAAAGTTTAGGTACAGTTGCTGAATTAGAATGTTTGAATTGTTGCTTCTTTAGTGGATTATGTTTTCAATGAACTGTTTGAGGTTTATGATTATGTTGACTGTGATTGAAGTAAAACTCCATGTCATGTTCTTGCCACTGTTTATTAACGGCCCTTGCGGGCCACTGTTTATTAACGGCCCTTGCGGTCCACTGTTTATTAACGGCCCTTGCGGTCCACTATTTATTAATGGCCCTTGCGGTCCACTGTTTATTAACGGCCCTTGCGGTCCACTGTTTATTGATTGCCCAATGCGGGTACATGGTTTGTGTGTGAAATGTTAATGTGTGGATTGGTTTATAAGTGTCTAATAATTTAAGTTAACAAACTTAGAAATTACGTGTGAGATCACCTAATGAAAGGATAAAGACAAGACCAAGTTGTCTTATGCTATGTTTGCACCATTGTTATGTTCATGCCAAGGTATATATTAATATACATCACTGTTAGGGTGACGACCCTGTTCATGCATGGATTAGCGTACTAGTGGGAGGGGAAGTCATGAGCCCCAAAACCTAGGCCCCGTCATCGTTTGTCCCTGGTAGAGAATCGCCAGGGAATGGGTTTGCCGGTAGCTTTCAAATAAAGTTGCCGGTGATATGCTAACAATCATTGTTTCAGATATATTTCTCGTAGTCAGCTTAAGGGCTACGGGTCATATTAAGGATTGTCTCTTGTAGTCGGCTTAAGGGCTACGAGGGACAATGTTAGAGTTCTCCACGTAGTCAACTTTAAGGACTACGATTAATGAATCAAGCATAATGAACCGAGAGAGTTAGTGAGGGGTCTTGATAGAACTTACTGAGATAATGTTATCTCACCCTTTATGATTTGTGGTTTTTAGGGAAAGTTAAAGGCGATAAGGCGGTTATGGAGCAACCTAGAGGAGATGCCGATGTTTAGTTTATGTGCTTTGTATTTTCTACTGTCTGATTTGTATCTTTGATTGTACGACTTATTATTGTATCAAGTTGTAAAATCGCTTCCGCAACTTTCTATTTTAGTATTGAACACTAGGCATGAGAAGTTGTAAGACACGTATTTCAGATTATGTTAAGTTATGTAACCGCGTTCGATAATTTATTATCAAAATTTTTTAGTCGTGTTCAATATCTGAGACAGGAAGTAACTCTGATGTATGCCAAGTGGTACATTTCGATGTTTCTACAAGTTAGTAAATATCGAGGTGTTACATTTGGTATAAAGAAAAGAAATGAGTAATGTACAAAAAAAAAACAAGAGTAAAAGCCAGAATTCGTCCCTGACAATTTTTTCGTGGGACGAATTCGTCCCTGAAAATTTTTTTGAGACACATTGGTCCCTGACAATTCCAAAACGAGACACGTTAGTCCCTCCATCCATTTAACCGTTACCAGCACAATAAACGTGTCCTATGTGGCACGTTAAGTGCCACGTGTCACGTTAAGTGCCACGTGTCACGTTAGATTTAAAAAAGGGACGAATCGGTCCCTGACAATTTAAAAAAGAGACGAATCAGTCCTCTGTTACTATTCATCGTCTTCTACCTCCAAACCTCCAAATCCCCAATCAACGAAGGTTCCACCCCTCCCCCCTCACCGATCCTCCTCTCTCACAGCCCCCCTCTCTGGTTCGCTCTCCCCTCCCTCTCTGGTTCGCTCTCCCCTCCCTCTCTGGTTCGTTCTCCCCTCACCGATCCTCCTCCCTATCTCTCTTCGCATCTCGCCGTTCCCTCTCTCGCCGTTCTCTCTCTCGTCGCTCTCCCTCCTCTCTTCTTCTCCTCCTCTCTTCTATCCCTTTCGTTCCTACGGTGAGGGTTTGGTAAGTGATGGCTTACGGTGGTGAGAGGGGAGAGCGAGATCTACGAGAGGCTGTGGTTGTGCGATCTGCGAGAGTGAGATCTGCGGGAGGTGGAGTGCGATCTGCGAGAGTGAGAAGGAGATGGAGAGGAGAAGAGAGGGAGGGATGAGTTCCAGATTTAACGTGAGTGAGGAGAGAGAGATGAGTTCCAGATCTGGGGGGAGGGGTTCACGGTGGGGGGAGGGGTGAACAGTGGAACGGAGGGGGGAGGAAGAGGAACAGTTGGTGGAACGGAGGGGGGAGGGGGTGAACAGTGGAACGGATGGGGGAGGGGTGATTTGTCCCCTTTTCAAAAAAGTCAGGGACTGATTTGTCCCATTTTCAAATTTGTAAAGTCAGGGACTTATTTGTCCCAAAATAAACGTGGCAGTTAACGTGACACGTGGCACTTAACGTGCCACGTAGGACACGTTTACTGTGCTGGTAACGGTTAAATGGATGGAGGGACTAACATGTCTCGTTTTGGAATTGTCAGGGACCAATGTGTCTCAAAAAAATTGTCAGGGACGAATTCGTCCCACAAAAAAAATGTCAAGGACGAATTTGGGCCTTTACTCAAAAAAACAAACTAAAAAGAAAGGGGCCAGAGGTATCAACGCGATATATGGAAAGCCCCGTCACGAGGGTCTTGTATGTTGACGGTGGTAGAGCCACGATTGTAGCATTGAGATACGGTCAGCGTGGCTCGCTCCATCACCACTGATGTATCTACATCACTGACCCCATTTCTCTCTCTTTCACTGTCCCCTCAATTGTACCTATAGGCTATAGCCCACCCTATATATAAATAACTACTGCTGCTGCCAGCACAAGATTGCTCACATTTGCAAGTTAACAAACACAAAAGTGGAGTCACTAGCATTGCAGTTTATTGTCTGCATTGTATTTATTTAGACACATACATATATTTTTAGTGGCAGATAGTGGACAAATTTGTAACATTTACCTCAGAATCTCAGAT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	14	61	2.60E-28
PF00249.34	Myb_DNA-binding	67	112	2.60E-28
PF13921.9	Myb_DNA-bind_6	17	75	1.20E-16
PF13921.9	Myb_DNA-bind_6	71	117	1.20E-16

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0005886	plasma membrane	Cellular Component
GO:0051555	flavonol biosynthetic process	Biological Process
GO:0010224	response to UV-B	Biological Process
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0007155	cell adhesion	Biological Process

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A896WBX9	_

SwissProt

SwissProt term	Description
MYB12_ARATH	Transcription factor MYB12

KEGG

KO	Description	Enzyme
K09422	transcription factor MYB, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G47460	myb domain protein 12
Medicago sativa L.	MsG0780041349.01.T01	_
Oryza sativa L.	LOC_Os01g19970.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa016768	_
Glycyrrhiza uralensis Fisch.	Glyur000237s00014382.1	_
Codonopsis lanceolata	Cl_chr06_38500T	_
Arachis hypogaea L.	AH06G04320.1	transcription factor MYB12-like like

Expression pattern