| Gene ID | Annotation |
|---|---|
| Am09G019880.1 | spliceosomal protein U1A |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am09G019880.1 | mRNA | Chr09 | 69285416 | 69290467 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00076.25 | RRM_1 | 17 | 87 | 5.40E-24 |
| PF00076.25 | RRM_1 | 172 | 231 | 5.40E-24 |
| PF13893.9 | RRM_5 | 163 | 234 | 1.30E-11 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0030532 | small nuclear ribonucleoprotein complex | Cellular Component |
| GO:0006397 | mRNA processing | Biological Process |
| GO:0003723 | RNA binding | Molecular Function |
| GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | Biological Process |
| InterPro term | Description |
|---|---|
| IPR035979 | RNA-binding domain superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| trEMBL term | Description |
|---|---|
| A0A9D4XR82 | _ |
| SwissProt term | Description |
|---|---|
| RU1A_ARATH | U1 small nuclear ribonucleoprotein A |
| KO | Description | Enzyme |
|---|---|---|
| K11091 | U1 small nuclear ribonucleoprotein A |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT2G47580 | spliceosomal protein U1A |
| Medicago sativa L. | MsG0780041306.01.T01 | _ |
| Oryza sativa L. | LOC_Os05g06280.1 | ATKINESIN-13A/KINESIN-13A, putative, expressed |
| Cucumis sativus L. | Csa003085 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur005881s00042999.1 | _ |
| Codonopsis lanceolata | Cl_chr06_39210T | _ |
| Arachis hypogaea L. | AH16G06800.1 | U1 small nuclear ribonucleoprotein A like |