Detail information of Am09G018960.1 Annotation
Gene IDAnnotation
Am09G018960.1 RING-H2 group F2A
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am09G018960.1mRNAChr096723287267238318-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF13639.9zf-RING_233749.60E-09
PF12678.10zf-rbx128744.30E-07
PF13923.9zf-C3HC4_234748.70E-07
PF17123.8zf-RING_1134612.50E-06
PF00097.28zf-C3HC434742.60E-06
Gene family
Gene familySubfamily
Ubiquitin FamilyRING

Gene Ontology
GO termDescriptionCategory
GO:0004842ubiquitin-protein transferase activityMolecular Function

InterPro
InterPro termDescription
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

trEMBL
trEMBL termDescription
A0AAN9LPT9 _

SwissProt
SwissProt termDescription
RHF2A_ARATHE3 ubiquitin-protein ligase RHF2A

KEGG
KODescriptionEnzyme
K19043E3 ubiquitin-protein ligase RHF[EC: 2.3.2.27]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G22000 RING-H2 group F2A
Medicago sativa L.MsG0280010577.01.T01 _
Oryza sativa L.LOC_Os11g36430.3zinc finger, C3HC4 type domain containing protein, expressed
Cucumis sativus L.Csa002503 _
Glycyrrhiza uralensis Fisch.Glyur000475s00029918.1 _
Codonopsis lanceolataCl_chr04_55030T _
Arachis hypogaea L.AH10G26340.1E3 ubiquitin-protein ligase RHF2A like

Expression pattern