Detail information of Am09G018550.1 Annotation
Gene IDAnnotation
Am09G018550.1 Pentatricopeptide repeat (PPR-like) superfamily protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am09G018550.1mRNAChr096585870665860675+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF01535.23PPR1812111.00E-66
PF01535.23PPR2132421.00E-66
PF01535.23PPR2743041.00E-66
PF13041.9PPR_2771248.70E-66
PF13041.9PPR_21782128.70E-66
PF13041.9PPR_22102548.70E-66
PF13041.9PPR_22713098.70E-66
PF13041.9PPR_23744218.70E-66
PF20431.1E_motif4915522.40E-22
Gene family
Gene familySubfamily
----

Gene Ontology
GO termDescriptionCategory
GO:0003723RNA bindingMolecular Function
GO:0043231intracellular membrane-bounded organelleCellular Component
GO:0004252serine-type endopeptidase activityMolecular Function
GO:0004519endonuclease activityMolecular Function
GO:0006508proteolysisBiological Process

InterPro
InterPro termDescription
IPR011990Tetratricopeptide-like helical domain superfamily
IPR046960Pentatricopeptide repeat-containing protein At4g14850-like, plant
IPR002885Pentatricopeptide repeat
IPR046848E motif

trEMBL
trEMBL termDescription
A0A1S2XTC2 _

SwissProt
SwissProt termDescription
PP403_ARATHPutative pentatricopeptide repeat-containing protein At5g37570

KEGG
KODescriptionEnzyme
------

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G37570 Pentatricopeptide repeat (PPR-like) superfamily protein
Medicago sativa L.MsG0780041163.01.T02 _
Oryza sativa L.LOC_Os04g33840.1pentatricopeptide, putative, expressed
Cucumis sativus L.Csa012000 _
Glycyrrhiza uralensis Fisch.Glyur000516s00022260.1 _
Codonopsis lanceolataCl_chr08_00090T _
Arachis hypogaea L.AH19G38080.1Putative pentatricopeptide repeat-containing protein At5g37570 like

Expression pattern