Gene detail

Detail information of Am09G018190.1 Annotation

Gene ID	Annotation
Am09G018190.1	Transducin/WD40 repeat-like superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am09G018190.1	mRNA	Chr09	65043078	65049364	-

Sequences

CDS:

>Am09G018190.1
ATGGAGAACTTTGATTTGAAAGAGGTTCAGAGACTCGAAGGTCACAGCGATAGGGTTTGGAGCTTGGATTGGAACCCCGCTACCGGTCACGACGGTATTCCTCTCGTCTTCGCTTCTTGCAGCGGCGATAAAACCGTCCGAATCTGGGAACAGAACCTATCCACTTCCCTCTTCTCCTGCAAGGCGGTTTTGGATGAAACACACACTCGAACTGTTCGATCTTGTGCTTGGTCGCCGTCTGGGAAATTGTTGGCTACTGCAAGTTTTGATGCTACCACTGCCATATGGGAAAATGTTGGGGGTGATTTTGAGTGTGTGTCTACTTTGGAGGGACATGAAAATGAAATAAAGAGTGTGTCATGGAATGCAGCTGGCAATTTGCTTGCAACTTGTAGTAGAGATAAGTCTGTTTGGATATGGGAAGTGGTGGCAGGCAATAGCTTTGATTGTGTGTCAGTGCTGCAAGGACATACCCAGGATGTGAAAATGGTGAAGTGGCATCCCACAGAGGATATATTATTTTCATGTAGCTATGATAACAGTGTCAAGGTCTGGGCAGATGAAGAAGACGGTGATGATTGGCAGTGTGTTCAAACTCTTGGAGAATCCAATAATGGTCATACTTCTACTGTTTGGGCTCTCTCCTTCAATGCTAGGGGAGACAAAATGGTTACCTGTAGTGATGATCTTACCCTGAAGGTGTGGGAGATAGAAAACATAGAGAAGCAATCTGGTGGTGAATTTTCACCTTGGAGACATCTTTGCACTCTTTCAGGGTATCATGAGCGGACAATTTTCTCAGTTCACTGGTCAAGAGGAGGTATCTTTGCCAGTGGAGCTGCTGACGACACTATACAGTTTTTTGTGGATAACAATGAAAGTCAGGTTGATGCTCCTCTGTACAAGTCCTTACTGAAGAAGGAGAAGGCTCATGACATGGATATAAATTCTGTGCAGTGGAGCCCTGGGGAGAAGCCGCTACTAGCCTCTGCAAGTGATGATGGGACAATCAAGGTGTGGAATCTGTTTGATATAGAAAACGGTGAGTTGGATCTTAGAGGCTTACTGAAATTCAGGAAAGCCTTCAAGACTCAGAGCGCTTACAGAGCTACTTAG

Protein:

Promoter(3k):

>AM09G018190.1
ACAAAAGGTCAAGTTACTCCTTTGGCGCATGGCTAGAGGATGCCTTCCTACATGATGCAATCTTCAGAAACGACATGTGCAGTGTCCTCGAGTGTGTCCTCAGTGCAACGAATATGATGAGGAAGAGCTTCATGTGTTTTTTGGTTGTAAGAAGGCGGAGGAGGTTTGGCGACGTGCTGGTCTCTAGAACGTCGTTAGCGAGAAGTTGCAGCCTGGTGTTGGTTTTAACGTGGTGCTCTCTGCGATGCTCTCTTGTGGAGGTACACATCAAGCGAAGTCTATGGCTATGCAGTTTTGGTGTATTTGGAAACGTCGCAACGATCGAGTTTTGGAACAGGTTGACCGGCCAGTTAGTGTCTCGGCCAGAATAGCTATGGAGGTCTTGTATGATTGGGAGGCGGTCCGCAATGTGGGCGTTAATGTTACACGTGATCATTCAATTCCCAGCCATGTCGCATGGTCGAAGCCAGCGATTGGAGAGCTGAAATGTAACGTCGACACGACAAATTTTGAACCAGAAGCTATGTTTGGCTTGGGTCTTTGTGTTAGGGACGATAAGGGCGACTTTGTGGCAGCAAAAACCATGAAGTTTAATGGCATTCCAGCCCCCCAAAAAGCTGAAGCAAAAGGTGTGTATGAGGCTATCAAGTGGCTCATTGAGCAAGGAGTCCAGCGAGCTACCAATGAACTGGATTATCTTCCAGTGGTTAATGGCATCAACGGAAACCATCTCATGACAACAGAAATAGGCTCTATCATTAGTAGTTGCAAGTCTATTTTATCTATTCATCAAAAGTATAGGTGTAGTTTTGTCCGGAGACAAGCCAATGTTGTTGCACATTATTCTCTTGCGAGAGCATCAATATTTTTTGCTTGTTCTCATATTTTTGATTACATTCCTCCGGAGACAAGCCAATGTTGTTGCACATTATTCTCTTGCGAGAGAATCAATATTTTTTGCTTGTTCTCATATTTTTGATTACATTCCAACCTATATTCGTGATACTCTTTATAATGAAATGAAGTGATTTGGTTTCCGTCAAAAAATATATATTTAGCATATTAACTATTCCTATTTTCTTTAGAAAAATATTCTCTAAATTGAGATTTTAGCTTATCAACTTATTTACAAAAGTCTATACTCAAATTTTGTAGATTCTCATAAAAAAAATAGCCAAGTATGCTTTTAAAGAGACTCTTGGTCCTTGTCAAATTTTCATTAAGGTTAAACTAGACCTTTAAAATGGGTCTGATCAAAAGCATAACTCAACTCACTATTGGGTATCTAAGTGTGAGAAGTCTCGCATCATCTAATCTAACCTAATAATACATAAAATGAAGAGTATATAAAAGGCTACCCTCATAAACCTTTTACCTCAAGGTTTTAGAACTAAATAGGGTCGAAACTCTTATTAATCATAATAAAAATAAGGCTTAAATATGTTTCAAGCCCCTGCAAATATAACGTGTTTTGGTTTAAGCCCCTGCAAAAAAAAAATTAGTAAAAAACCCTTGCAAAATACATTGTTTTGATATAAGCCATTCTGTTAACCTAACGTTACAAAAACACTGAGTTGACTAACAGAAGTCTGAGTCGTCGTTTATTTATTTTTTCTAATTTATTTTTAATGCTTACTTGTAATGCCAAGTCATTATTTTTAATTTTAATTAATTTTTATTCTTCTCCATCTTCAACCTCCAACCCTCAACCTCCATCTTCAACCTCCAACCTTCAACCTCCATCACCACCACCTTCTCCATCTTCAACCACGTTTGGAAACCCTAAACTCAAATCCCAAATTAAACCCAGATTATTTGATTTTTATTGAACTTCAAACCCATATTTTTATTGAACTTTAAACCCAGATTTGATTTTATGTGATTATTTGACAAATCGTTCTCTTTGCTGGGTTTGTGTTTATCTTGTTATTTTTCTTCCTTCTCTTTAATCTCCTTTTCAACCTCAGTGTCTCAACCTCGCTGTCTCAACATTGCAAATCAGATTTATGCTACTTCCAACGTTCAACGAATTTGCAGAAAATCGATCGTTCCGAATCCGTTCCATGAAAAAATGTTGTATTTCGAGTCTGAATCTCTCGTTCTGTTTGTTGGGTTTGTGTAACTGGGTTTGGAATCAATTTGGGGATTTAGGGTAACTGGGTTTGGGGGAAAGATGTAAGCTTTGGAATAAAATCTGAGAGAAAGATAGAGGGAGATGAAGCGCGGAGAGAAAGGGAGACAAGAACTGTAATTGTAGAGACTTCCACAGAAGAAGAAAGAGGTTTGTTGAGAAGAGGTGGTGATGGAGAAAAAAAGAATAATGGAGAATAATAAAAATAAAAAACAATGATTTGGCAGTTCAGCATAAAAAATTTTGAAAAGAAAAATAAATGACACGTCAGATTTCTTTTAGCCACATAGGCTAACAGAAGGGTCTATTTCAAAAAGATTGCTTTTGCAGGGGCTTTTTACTAATTTATTTTTTTGCAGGGACTTAAACCAAAACACGCTATATTTACAGGGTCTAAAACATATTTAAGCCTAAAAGAGTGCAAAGGATATCGAAGGAGTGCACTAAAAGAGTGCAAGAAGGAGGTTCCGGGTTCAAACCCCCGAAAACTAACATTCCCCCACTAACATCGCTTATAAAAAAATATTTAGGCCTAAAAATAAATACAAATGCAGTTAATAGAAAGACACAACACGAGCCTAGTAGAGAGTGTCCATACTCTTCTTCTGTTTGCACTTTGCACAATAGAAAGAAAACTAATAAAAACTCTTCTGTTTTGCACACGCCACATTCCAACTTTTTTTTGTTTTGGTCGGTTTTGAAAAGAATCTCCCCTTGTCTCGGGCGCGTGGTATACCCTCTGAAACTGTTAGCCGCTTTTCCGAGAAAGTAGGAAATAGTTTGCTGATTGCCTGATTGAATTTGAAGTGAAGAAGAAACAAGTGAGGATAGTTTGTTTGTGTGTGTATGCTGAGTCGAATCGCTTAGCG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00400.35	WD40	104	140	2.80E-43
PF00400.35	WD40	149	185	2.80E-43
PF04762.15	IKI3	43	179	5.00E-07

Gene family

Gene family	Subfamily
Ubiquitin Family	DWD

Gene Ontology

GO term	Description	Category
GO:0097361	cytosolic [4Fe-4S] assembly targeting complex	Cellular Component
GO:0016226	iron-sulfur cluster assembly	Biological Process
GO:0016757	glycosyltransferase activity	Molecular Function

InterPro

InterPro term	Description
IPR036322	WD40-repeat-containing domain superfamily
IPR015943	WD40/YVTN repeat-like-containing domain superfamily
IPR019775	WD40 repeat, conserved site
IPR001680	WD40 repeat
IPR028608	Probable cytosolic iron-sulfur protein assembly protein, CIAO1/Cia1
IPR020472	G-protein beta WD-40 repeat

trEMBL

trEMBL term	Description
A0A1S2XUH8	_

SwissProt

SwissProt term	Description
CIA1_ARATH	Protein CIA1

KEGG

KO	Description	Enzyme
K24730	cytosolic iron-sulfur protein assembly protein CIAO1

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G26060	Transducin/WD40 repeat-like superfamily protein
Medicago sativa L.	MsG0780041122.01.T01	_
Oryza sativa L.	LOC_Os07g14830.1	WD domain, G-beta repeat domain containing protein, expressed
Cucumis sativus L.	Csa019657	_
Glycyrrhiza uralensis Fisch.	Glyur000007s00002870.1	_
Codonopsis lanceolata	Cl_chr04_07440T	_
Arachis hypogaea L.	AH06G18140.2	Protein CIA1 like

Expression pattern