Gene detail

Detail information of Am09G017980.1 Annotation

Gene ID	Annotation
Am09G017980.1	pleiotropic drug resistance 11

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am09G017980.1	mRNA	Chr09	64436605	64445576	-

Sequences

CDS:

>Am09G017980.1
ATGGCATCTGAATTACCGAGAGGTGAATTGGCGATATCAAGGAGCAACCGTCAGAGCTGGAGGTCGACAAGTTTCAGGGATGCGTGGACAGCAACGACAACGGTACCGGATGTGTTCGAGCGAAGTGACCGGCACACGCAGGAAGATGACGAGTACCATCTCACTTGGGCAGCCATTGAGCGGTTGCCAACTATGGAACGCATGAGAAAAGGTGTAATAAAACATGTCACTGAAAATGGAAAGGTGGTGCATGATGAAGTCGATGTTGCTCATCTTGCCTTACCTGACAAGAAACTCTTGTTGGAAAGCATCCTCAAGTTTGTCAAAGAAGATAATGAGAAATTCCTCCGCAAACTTAGAGACAGACAAGAGAGGGTAGGGATTGAGATTCCAAAAATTGAAGTTAGGTATGAGAATTTATCAGTGGAGGGAGATATATATGTTGGGAGCAGAGCGCTTCCTACTTTGCTTAATGTTACTTTGAACACCTTAGAGAGTGTTCTGGGATTGTTTCGCCTTGCGCCTTCCAAAAAGAGGAAAATTCAGGTTCTCAAAGCTGTTAGTGGAATGGTGAAACCATCAAGGATGACACTTCTTCTCGGCCCTCCAGCTTCTGGGAAAACATCATTGCTTCTAGCACTTGCAGGAAAACTTGATAGTAATTTAAGGGCTTCTGGGAAAATCACTTATTGTGGTCATGAACTAAATGAATTCGTTGCTACAAAAACCTGTGCCTATATCAGTCAGCATGACATTCACCATGGAGAAATGACAGTGAGAGAGACATTGGATTTTTCATCACGTTGTCTAGGTGTTGGCACTAGATATGAAATGTTGATGGAACTCTCAAGGAGGGAGAGAGATGCAGGAATTAAGCCAGACCCTGAGATTGATGCATTCATGAAAGCTATAGCATTATCAGGCCAAAAGGCCAGTTTGGTAACAGATTATGTTCTCAAGATGTTGGGGTTGGATATTTGTGCTGACATTATGGTTGGTGATGAAATGAGAAGAGGTATCTCTGGAGGACAAAAGAAGCGAGTAACGACAGGGGAGATGCTGGTTGGACCAGCAAAAGCACTGTTTATGGATGAAATATCAACAGGATTGGACAGTTCCACCACTTTTCAAATATGCAAGTTCATGAGACAAATGGTTCATATAATGGATGTAACCATGGTGATTTCTCTTTTGCAACCTGCACCAGAGACATTTGAACTCTTTGACGACATTATCCTACTCTCAGATGGGCAAATTGTATACCAAGGTCCACGTGAGAATGTGTTAGAGTTCTTTGAAAACATGGGTTTCAAATGTCCAGAGAGAAAAGGAGTTGCTGATTTTTTACAAGAAGTGACATCCAAGAAAGACCAGCAACAATATTGGTTCAAAAGAGATGAACCTTATAGATATGTTTCAGTTTCTGAATTTGTAGATTCCTTTACTTCATTTCACATCGGAGAGCAACTCGTGACTCAGCTTCGAGTTCCCTATGATAAGAGTCAAACCGATCCAGCTGCCTTAGTAAAAGAAAAGTATGGTATATCAAACTGGGAACTATTTAAGGCATGCTTTTCAAGAGAATGGTTGCTTATGAAGCGTAACTCTTTTGTTTACATATTCAAAACAACACAGATAACAATCATGGCTATTGTTACTTTCACACTGTTCTTTAGAACAAAAATGCCAGTTGGCACTGTTCAAGATGGACAAAAATTCTATGGGGCACTATTCTTTACTTTGATGAATGTGATGTTTAATGGGATGGCAGAATTATCCATGACTGTTTTTAGCCTTCCTGTCTTCTACAAACAAAGGGATTTCATGTTCTTCCCTGCATGGGCGTTTGCCTTACCTATATGGATTCTTAGGATCCCTATCTCCTTTATGGAATCACTGATATGGATTCTCCTTACATATTTTACAGTTGGGCTTGCTCCTTCTGCTAGCAGATTTTTCCGACAATTCTTGGCGTTATTTAGCATTCATCAGATGGCTCTCTCTCTATTTCGGTGTATTGCTGCAGTTGGTAGAACACTAGTTGTTTCTAATGCGTTTGGTACCTTGACCTTGCTAGTGGTATTTGTGCTAGGAGGTTTTATTATTTCCAAAGACGACATTAAGCCATGGATGATATGGGGCTATTATATATCTCCTATAATGTATGGCCAGAATGCCATAGCAATCAATGAATTCTTAGACAAAAGATGGAGTCAACCAAATACAGACCCTAGAATTGATGCACCTACAGTTGGAAAAGTACTTCTCAAATCTAGAGGCTTATTCACTGAAGATTATTGGTATTGGATCTGCATTGGAGCTTTGGTTGGGTTTTCCCTTCTCTTCAACTTTCTATTCATTGTTGCATTGACTTATTTGAATCCTTTTGGCGATTCAAAAGCAGTCACTGTGGATGAAGGTGATAACAAGAATGAAAGTCCAACTTATAGACACCATAACCTTGGAGGTACAGAACTGGCAGTAAAAAATACTTCAGAAATTCCTAGTTCTTCAAACCAAGAACCGAGAAGAGGAATGGTTCTACCATTTCAATCTCTTTCCCTGGCATTCAATCATATTAGCTACTACGTAGACATGCCAGCAGAAATGAAGAGTCAGGGAATCAATAAGGATCGGCTTCAACTACTACAGGATGTTAGTGGTGCATTTAGACCAAGCATATTAACAGCACTTGTAGGTGTTAGTGGTGCTGGGAAGACAACTCTCATGGATGTGCTAGCTGGAAGAAAAACAGGTGGATACATTGAAGGAAGTATTAGCGTATCCGGTTACCCAAAGAACCAATCAACATTTGCTCGAATTAGTGGTTATTGCGAACAAAATGACATTCATTCTCCACAACTTACTGTCTATGAATCACTATTATTTTCAGCATGGCTCCGTCTTCCTTCAGATGTAAATACACAAACAAGGAAGATGTTTGTTGAACAAGTGATGGAGTTGGTTGAGCTTAAACCACTTAGAGATGCTCTTGTGGGCCTTCCAGGTGTAGATGGTCTATCAACTGAACAAAGAAAAAGGCTTACTATTGCTGTAGAGCTGGTTGCCAACCCTTCAATCATCTTCATGGATGAACCAACATCAGGCCTTGATGCTAGAGCTGCAGCTATTGTTATGCGAACTGTGAGAAATACAGTAGACACAGGCAGAACTGTTGTGTGCACAATTCACCAACCTAGCATTGACATTTTTGAAGCTTTTGATGAGTTATTGTTGATGAAAAGAGGAGGACAAGTTATCTATGCTGGACCTCTTGGTCGCCACTCACATAAACTGGTTGAATATTTCGAAGCTGTCTCAGGGGTTCCAAAAATTAATGATGGTTATAATCCGGCTACATGGATGCTTGACATCAGCTCTACTTCAATGGAGGCTCAACTAGATGTAGATTTTGCAGACATTTATGCTAACTCTACTCTTTACCAGAGGAATCAAGAACTTATTAAGGAGTTGAGTACTCCAACATCTAACTCGAAGGACTTGTACTTCCCAACCAAATATTCTCAATCATTTTTGGTTCAGTGCATAGCTAACTTCTGGAAACAACATTTATCCTATTGGAGGAATCCTCAATATAATGCCGTTCGATTCTTGATGACTGTGATCATTGCAATATTGTTTGGACTCATTTTTTGGAAACAAGCCAGAAAAACCCAAAAACAACAAGATTTACTGAATCTTTTGGGAGCCATGTATACTGCCGTGCTTTTTCTTGGGGTGACGAATGCTTCAGCTGTGCAACCAGTTGTTTCCATTGAAAGGACAGTCTTCTATAGGGAAAGAGCAGCAGGGATGTATTCTGCACTACCCTATGCATTTGGCCTGGTACAAAAAAGTGGTAATAGAGATAATTTACAATGCAATTCAAACAACCATTTACGCTCTACTACTTTACGCCATGCTTGGATTTGA

Protein:

>Am09G017980.1
MASELPRGELAISRSNRQSWRSTSFRDAWTATTTVPDVFERSDRHTQEDDEYHLTWAAIERLPTMERMRKGVIKHVTENGKVVHDEVDVAHLALPDKKLLLESILKFVKEDNEKFLRKLRDRQERVGIEIPKIEVRYENLSVEGDIYVGSRALPTLLNVTLNTLESVLGLFRLAPSKKRKIQVLKAVSGMVKPSRMTLLLGPPASGKTSLLLALAGKLDSNLRASGKITYCGHELNEFVATKTCAYISQHDIHHGEMTVRETLDFSSRCLGVGTRYEMLMELSRRERDAGIKPDPEIDAFMKAIALSGQKASLVTDYVLKMLGLDICADIMVGDEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQICKFMRQMVHIMDVTMVISLLQPAPETFELFDDIILLSDGQIVYQGPRENVLEFFENMGFKCPERKGVADFLQEVTSKKDQQQYWFKRDEPYRYVSVSEFVDSFTSFHIGEQLVTQLRVPYDKSQTDPAALVKEKYGISNWELFKACFSREWLLMKRNSFVYIFKTTQITIMAIVTFTLFFRTKMPVGTVQDGQKFYGALFFTLMNVMFNGMAELSMTVFSLPVFYKQRDFMFFPAWAFALPIWILRIPISFMESLIWILLTYFTVGLAPSASRFFRQFLALFSIHQMALSLFRCIAAVGRTLVVSNAFGTLTLLVVFVLGGFIISKDDIKPWMIWGYYISPIMYGQNAIAINEFLDKRWSQPNTDPRIDAPTVGKVLLKSRGLFTEDYWYWICIGALVGFSLLFNFLFIVALTYLNPFGDSKAVTVDEGDNKNESPTYRHHNLGGTELAVKNTSEIPSSSNQEPRRGMVLPFQSLSLAFNHISYYVDMPAEMKSQGINKDRLQLLQDVSGAFRPSILTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISVSGYPKNQSTFARISGYCEQNDIHSPQLTVYESLLFSAWLRLPSDVNTQTRKMFVEQVMELVELKPLRDALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGRHSHKLVEYFEAVSGVPKINDGYNPATWMLDISSTSMEAQLDVDFADIYANSTLYQRNQELIKELSTPTSNSKDLYFPTKYSQSFLVQCIANFWKQHLSYWRNPQYNAVRFLMTVIIAILFGLIFWKQARKTQKQQDLLNLLGAMYTAVLFLGVTNASAVQPVVSIERTVFYRERAAGMYSALPYAFGLVQKSGNRDNLQCNSNNHLRSTTLRHAWI*

Promoter(3k):

>AM09G017980.1
ATTATGATTAAATGATGTGACATTTTGTTTTTTTTAAATCAAAAACAATTAACAAATTAACAAAAACTTAATTACTTCATCTTCTTCTTCCCCGCCCAGCATTTTGCAGAAAACCCTAAATCCCAAATTGAAAATCCTCCTCCCTGCTCCTTGAATCAAGATCCATTCTACTCCCTCCGTTCAATTTTCGTCAACTTTCATCAATCCTCCTAGGTTCAGTTTGGGTTTTGGTTTGGGATGGGGACCATTTGAGGGGGATGTTAGAAATTAAGTTTGAGACATTGGGAGTTTTTGGTTTTGGGTTTTGAAGAGATGATTAAATTGAAGAAGATGATGATCTTCTTACATTTAAGCTTCAGTGTTGTTGTTGTGATTTGTTCTGATGATGAGAAGAGTTTTGTTGTTGTGGGTTGGTTCTGATGATGATGAGAAATTGGGGGTTTTGGGATTGGGTTTTGTTGTGATTTGTTCTGAATATCCATGAAAAGAGAGTTGAGAAGAGTTGAAGAGTTGAAGGACGAAGAGTTGAAGAGTTGAAAAATCATGAACGAAGAGTTGAAGAGTGATTTATTTGTGGTGGTGGTGGTGATGGTGGCTCGCCAGAGGTGGTGGTGGCTCCCCGGGGAAGATGAAGATGGAGATGGGATGATTTTTCAAATCTGCGATTTTCCAGATCTGATGTGTTTTAGTGTTTTTTGTTTTTGTTAATTTTATTTTTCTTGTCTTGTCTTTTTGTCAATTTGGTCTCTTATGTTTTTTTTAAGTTTCAATTTGGTCCCCTATTTGTCACATCACTTAATGAGCTCCAAGTCAACCCTGACACTTAAGACGCCACATCAACAATTAACTTTCAACGTGGCATCCGTTAAAAATAATGGACGAAAAACACTAAAAAGGACCAAAATTAAACAAAAATGGAAGATAAGGGACCAAAACGGGACAAAAAAAGATAAATGACCAAAATGAAACCTAAAGCAAAGATAAAAGACCAAAAGTGCTATTTAGCCTAAAATTTATTCAGATTTTATTTGTTAAACAAAATTTTATTTTCAAAATTGTAAAGAAATTTTAAGGTTGAACAGAAAATCAAAATTTAAAATATAGGAAACGGAAAAATGAAAAGTAATCGTGAATAAAAAATTTACATCTCCAAATAAAAAACTATTTTTTTGTTTGGTGTACTTATGAGTCAAAAAAAGCATACTTTATTCCTCAAAGAAAAGCAAATTTTACTAGGCTGTCAAAAAATATTAGACATTCTGACTATGCAATAATTAATTGTGAGGAAAGAGACGAACAAACGTTAATTGCAATGAGATAAAAATAAATTAAAAAATGTATATATTAACGACCGTAAATTACATCAATACCCACGCATTTAAGTAACTTTCTACGTCCTCCGTTCCAAAACTTTAGTACTTTTTGCTTTTTATTTTTTTATTGTTTCAAAATAATGGTACTTTTAAAAACCCAATGTACAATTCACCACATTTTTTCAGATAAACCTTTTATATTTATCGAGTCTTTTAGAAACTCAAGACAACTGTTAACTCTTTTATTTTGATTTCAATATTCTAAGATAACTATAAAGGGGGTGTTTTAGTACGTAGCTAACACATTAATGATACCTTATCTTGCGTGTAACAAAACAAAAGTACCAAAGTTTGAGAACAGAGGGAGTAAAAGAAATAGTTGGATTGAGTGTCCACAACAAAAATGTGTAGGGTGCTATCTTACAACTTCTAGAAAATAGGTGGGTGTAAATTAGCAAACCCTTATATATTTATTCCTCAGAAAGAGCAGATTTTATTAGGCTGTCAAAAAATATTAGACTTTCTGACTATGCAATAATTAATGTACCATTAAACGACACTTGATATGAGACAAATAGAATATCTATTTTGTTTTGGGTGATTTTGAATTTTTAATTTAGTAGCATATTTTAGAAGTGTGTCTCGAAAATGCAACCTAGTAGTAAAACATAAGTGTTGTGGATATTGAGAACACGAATTGAAACCAACAACGCTCCATTTTCCTACTCTTCATTCTCCTATCCCCGACCGTTTGTAATAAGGAAAAATGCATCCTAAAAATTTCATTTTTTTTGGTACAATATTCTAGATTTTTTTTTTGTAATCAAAGTATCCTCCACGGTGACCGTGGAAACTAATGCTTCCAGGTATCAGAGATTTATTTAAGGCTTGACCTCTTCCAACAAATGTTTTTTCATACGCACCGGTCAAGGATCGAACCCTGGTTAAGGGAGCCCGAACCAACATGATTGTAGGTTGCCATGGTAATTAAAGTGTTATGATATTCATGAAGATCGGTTGCATTAAATGAAGAACAAGAATGGAAAAAAATCCAAATTGTAACTGCTCGCGATCCGATTCCATCATTTCTAGAATCATAAATAAGGCCTGGTTTTCCAGAAGTCTTCCATGATCCATCAGCTTTTGACAAATCAGGAAACATGAAAACCATATCTTGCTTATACTTAGGAAATCTTACAAAGGGGTCTCTTTGCTTTGCACATCATATATAGAGGTCAAATTGAATGTATAAAATTTATCATTATGACTTCATATTGTAATAGGCAGGTTTATTATTATTTTAGTTTACTCTAGAAAGAATATCTTCAAAAAATAACTCTAGAAAAGAAGAGTATCTTCTAAAGGTACGCTGCTTGTACTTTCCACATTTTAAATTGTTTAATGCTGCAATCGTATCCAATCTAAATTCATTATTAATAGATAATCTTACTTTACTAAAACATTGTACTAAAGCTTTTTGACTAAAATTTCCAACTAGTCAAAGTCAAAACTACTACCACTGAAAGTAAAAGACCGAATGAACTGGCTTCATAAATATACAACAAACGTATATGCTCTGTATGATATGCCACATTATACATATGAGATGAGATATAGGAAAGTTACTTTTCATCTCAAGCTTATATAAAGTGAGATATCTATCTGATTAGTTTGAGAAATCGATACA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01061.27	ABC2_membrane	520	732	6.80E-63
PF01061.27	ABC2_membrane	1181	1281	6.80E-63
PF00005.30	ABC_tran	184	366	1.00E-34
PF00005.30	ABC_tran	883	1035	1.00E-34
PF08370.14	PDR_assoc	737	802	6.30E-29
PF19055.3	ABC2_membrane_7	399	452	2.90E-17
PF19055.3	ABC2_membrane_7	1064	1130	2.90E-17
PF14510.9	ABC_trans_N	110	159	2.40E-13

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0140359	ABC-type transporter activity	Molecular Function
GO:0055085	transmembrane transport	Biological Process
GO:0016020	membrane	Cellular Component
GO:0016887	ATP hydrolysis activity	Molecular Function
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR013581	Plant PDR ABC transporter associated
IPR034003	ATP-binding cassette transporter, PDR-like subfamily G, domain 2
IPR029481	ABC-transporter, N-terminal domain
IPR013525	ABC-2 type transporter
IPR003439	ABC transporter-like, ATP-binding domain
IPR043926	ABC transporter family G domain
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A9D4XS83	_

SwissProt

SwissProt term	Description
AB39G_ARATH	ABC transporter G family member 39

KEGG

KO	Description	Enzyme
K08711	ATP-binding cassette, subfamily G (WHITE), member 2, PDR

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G66950	pleiotropic drug resistance 11
Medicago sativa L.	MsG0180005051.01.T01	_
Oryza sativa L.	LOC_Os02g11760.1	pleiotropic drug resistance protein, putative, expressed
Cucumis sativus L.	Csa011855	_
Glycyrrhiza uralensis Fisch.	Glyur000383s00019455.1	_
Codonopsis lanceolata	Cl_chr07_14790T	_
Arachis hypogaea L.	AH16G22080.1	ABC transporter G family member 39 like

Expression pattern