| Gene ID | Annotation |
|---|---|
| Am09G017860.1 | HhH-GPD base excision DNA repair family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am09G017860.1 | mRNA | Chr09 | 63874741 | 63885331 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF15628.9 | RRM_DME | 1625 | 1725 | 1.90E-56 |
| PF15629.9 | Perm-CXXC | 1591 | 1620 | 6.40E-12 |
| Gene family | Subfamily |
|---|---|
| Epigenetic Regulators | DNG3 |
| GO term | Description | Category |
|---|---|---|
| GO:0006284 | base-excision repair | Biological Process |
| GO:0019104 | DNA N-glycosylase activity | Molecular Function |
| GO:0051539 | 4 iron, 4 sulfur cluster binding | Molecular Function |
| GO:0003677 | DNA binding | Molecular Function |
| GO:0046872 | metal ion binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR028924 | Permuted single zf-CXXC unit |
| IPR003265 | HhH-GPD domain |
| IPR023170 | Helix-hairpin-helix, base-excision DNA repair, C-terminal |
| IPR003651 | Endonuclease III-like, iron-sulphur cluster loop motif |
| IPR044811 | DNA glycosylase, plant |
| IPR011257 | DNA glycosylase |
| IPR028925 | Demeter, RRM-fold domain |
| trEMBL term | Description |
|---|---|
| A0A396H9Z3 | _ |
| SwissProt term | Description |
|---|---|
| DME_ARATH | Transcriptional activator DEMETER |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G04560 | HhH-GPD base excision DNA repair family protein |
| Medicago sativa L. | MsG0780041078.01.T03 | _ |
| Oryza sativa L. | LOC_Os01g11900.1 | hhH-GPD superfamily base excision DNA repair protein, expressed |
| Cucumis sativus L. | Csa005084 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000075s00007175.1 | _ |
| Codonopsis lanceolata | Cl_chr07_14980T | _ |
| Arachis hypogaea L. | AH16G21270.1 | Transcriptional activator DEMETER like |