| Gene ID | Annotation |
|---|---|
| Am09G017800.1 | pentatricopeptide (PPR) repeat-containing protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am09G017800.1 | mRNA | Chr09 | 63712997 | 63717136 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 185 | 231 | 5.90E-140 |
| PF13041.9 | PPR_2 | 217 | 246 | 5.90E-140 |
| PF13041.9 | PPR_2 | 252 | 287 | 5.90E-140 |
| PF13041.9 | PPR_2 | 318 | 364 | 5.90E-140 |
| PF13041.9 | PPR_2 | 350 | 396 | 5.90E-140 |
| PF13041.9 | PPR_2 | 385 | 432 | 5.90E-140 |
| PF13041.9 | PPR_2 | 420 | 469 | 5.90E-140 |
| PF13041.9 | PPR_2 | 455 | 504 | 5.90E-140 |
| PF13041.9 | PPR_2 | 527 | 573 | 5.90E-140 |
| PF13041.9 | PPR_2 | 560 | 607 | 5.90E-140 |
| PF13041.9 | PPR_2 | 629 | 673 | 5.90E-140 |
| PF13041.9 | PPR_2 | 664 | 712 | 5.90E-140 |
| PF12854.10 | PPR_1 | 213 | 246 | 3.10E-121 |
| PF12854.10 | PPR_1 | 251 | 281 | 3.10E-121 |
| PF12854.10 | PPR_1 | 347 | 379 | 3.10E-121 |
| PF12854.10 | PPR_1 | 451 | 484 | 3.10E-121 |
| PF12854.10 | PPR_1 | 486 | 519 | 3.10E-121 |
| PF12854.10 | PPR_1 | 521 | 553 | 3.10E-121 |
| PF01535.23 | PPR | 186 | 215 | 4.10E-109 |
| PF01535.23 | PPR | 220 | 246 | 4.10E-109 |
| PF01535.23 | PPR | 255 | 284 | 4.10E-109 |
| PF01535.23 | PPR | 353 | 383 | 4.10E-109 |
| PF01535.23 | PPR | 424 | 453 | 4.10E-109 |
| PF01535.23 | PPR | 528 | 557 | 4.10E-109 |
| PF13812.9 | PPR_3 | 136 | 192 | 7.30E-88 |
| PF13812.9 | PPR_3 | 205 | 262 | 7.30E-88 |
| PF13812.9 | PPR_3 | 355 | 399 | 7.30E-88 |
| PF13812.9 | PPR_3 | 479 | 538 | 7.30E-88 |
| PF13812.9 | PPR_3 | 550 | 607 | 7.30E-88 |
| PF13812.9 | PPR_3 | 653 | 709 | 7.30E-88 |
| PF17177.7 | PPR_long | 84 | 203 | 3.50E-48 |
| PF17177.7 | PPR_long | 403 | 503 | 3.50E-48 |
| PF17177.7 | PPR_long | 506 | 611 | 3.50E-48 |
| PF17177.7 | PPR_long | 580 | 673 | 3.50E-48 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0010019 | chloroplast-nucleus signaling pathway | Biological Process |
| GO:0009507 | chloroplast | Cellular Component |
| GO:0031930 | mitochondria-nucleus signaling pathway | Biological Process |
| GO:0004519 | endonuclease activity | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| trEMBL term | Description |
|---|---|
| A0A9D4Y8D7 | _ |
| SwissProt term | Description |
|---|---|
| PP376_ARATH | Pentatricopeptide repeat-containing protein At5g12100, mitochondrial |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G12100 | pentatricopeptide (PPR) repeat-containing protein |
| Medicago sativa L. | MsG0780041074.01.T01 | _ |
| Oryza sativa L. | LOC_Os08g31110.1 | PPR repeat domain containing protein, putative, expressed |
| Cucumis sativus L. | Csa018244 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000075s00007182.1 | _ |
| Codonopsis lanceolata | Cl_chr04_50470T | _ |
| Arachis hypogaea L. | AH16G21170.1 | Pentatricopeptide repeat-containing protein At5g12100, mitochondrial like |