Detail information of Am09G017160.1 Annotation
Gene IDAnnotation
Am09G017160.1 Transducin/WD40 repeat-like superfamily protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am09G017160.1mRNAChr096221181662216876-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF13639.9zf-RING_21211682.40E-08
PF13445.9zf-RING_UBOX1221657.20E-07
Gene family
Gene familySubfamily
Ubiquitin FamilyRING

Gene Ontology
GO termDescriptionCategory
GO:0004842ubiquitin-protein transferase activityMolecular Function
GO:0005634nucleusCellular Component
GO:0016567protein ubiquitinationBiological Process
GO:0016874ligase activityMolecular Function
GO:0016020membraneCellular Component

InterPro
InterPro termDescription
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR015943WD40/YVTN repeat-like-containing domain superfamily
IPR037381E3 ubiquitin-protein ligase RFWD3

trEMBL
trEMBL termDescription
A0A1S2XU91 _

SwissProt
SwissProt termDescription
RFWD3_HUMANE3 ubiquitin-protein ligase RFWD3

KEGG
KODescriptionEnzyme
K15691E3 ubiquitin-protein ligase RFWD3[EC: 2.3.2.27]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G03450 Transducin/WD40 repeat-like superfamily protein
Medicago sativa L.MsG0780040982.01.T01 _
Oryza sativa L.LOC_Os03g01790.1zinc finger, C3HC4 type domain containing protein, expressed
Cucumis sativus L.Csa011954 _
Glycyrrhiza uralensis Fisch.Glyur000163s00011097.1 _
Codonopsis lanceolataCl_chr05_12090T _
Arachis hypogaea L.AH16G19330.1E3 ubiquitin-protein ligase RFWD3 like

Expression pattern