Gene detail

Detail information of Am09G016750.1 Annotation

Gene ID	Annotation
Am09G016750.1	Preprotein translocase Sec, Sec61-beta subunit protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am09G016750.1	mRNA	Chr09	61236739	61238694	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM09G016750.1
TGAAGTGGCTTATGGGGTTGATGTTAATTAGTTGGGTTTTGTTGGCTTTTAGCTATGAGAGGAAATAATGTAATGGTGCTAGTATTTAGTGATTTAATGATGTTATGGTGTTAGTATGTAGTGATGTATTAGGACACACGATGTACTAGGAGACTATGATGTTGTAATGATTTTTATGGAATTAATGAATGGATATGGTTTACTTACTTATGGTGTAAAGTTCAGCAGCATAATTGGTAATAACAACTTGGTAAAATTCAGCAGCATATTTTGCAGCATTTTAGCAGCATTGTGCAGTATTTTTGCAGCATTTTTTAGCAGCATTGTGCAGTATTTTGCAGCATTTCAGCACCATTTTTTAGCTGCATTTCAGCATTTTAAACATTCATTCAAAATAGACCTAAACATTCATTGAGTTTCCAAAATATATCCAAAACATTCCTAAACATTCATTGAGTTTCCAAAATACATCCAAAATAGACCTAAACATTTAAAACCCTAAAATCAGAATTTGAATATTTGACTAGGCATAAAAAACTTGTTTTTATAGTCCCCACAACAATAAAGAAGATACCAGTGCAGCAACCAAACCTTTAAAAACCCTAAAATCGAACGAACCTGTACACCCAATACAACGAATCCAAAAATCTTAAAAACCCTAAAATGACGAACCTGAAAGAGACGAAAGCAGCAACCACACCTTCGCGTTATCAACGTCGTCAGCAACCACACCTTCGCATTATCAACGTCATCAGCAACCACACCTTCGCGTTCTCTCTGCTTCGCGTGGCCTTTGTTTCTCACCCTCAACCTTCGCTCATCATCTCTCTGCCTTCGTGATTCAACTACAGTTGTTTTCCCCAAATTGATTTCTTACATTAAAAGGGTATTTTAGGGAATTCGTGTGACATGGCAGTCTACATATCAATTAAATCCAATTCAGCATTGCCACTTGTTTTAAAATAGGCCACATCAGTTGAAAACAAAAAAAACACGTGACAAATTGGCTTACAGATGGCAACAGGGACAAAAACGGATAAAAAAACATTTTGCAGGGACCATTTTTAAAAAAATATTTTTGCAGGGACTAAAATAGATAATCACTGTAATTGCAGGGACCAAAATGATATTTAAGCCTACAATTTTTAAGAAATATAAAAGTATTTTAAAGAAATACTATTTTTTAGAAAAAACATTTCTTCAAAAATAAAATAAGGAGGTTTAAGATCTCAAAAAAAAAGGTTTAAAGCTTTTATGAAAAAAAAAGGTTTTTTTTGTAAGAAAAATGAAAAAAAAAATTTTTGGGGAAAAACGTTTTTTTTACATAAGGTAAAGTTGGAACTTTGGATATTTGGGTATATCGCCAATGAGGGTAAAATTGGAACGTTGGAATTAGGCTGACCACATGGCAAAGAGCCATTGGTTATTTTCACGTGGACTAACAAAACGTATCCAAGTCAAATGCTTCTCTCTCTCTCTTATAAATAAAAAAGTGTTACGAAGTAAACCATAAACGCAGTATCCTCACAACACGCAACGAGTTCTCCTTCTCAGATCTCCGACGCGAACGATCGTTAATCCGAAGTCCTCATTCAGGTTCGTTTCAATTTTCAGTTGTTGCTGTTGTTGTTTAAGTTGATTTGAGGAATGTACGCAAAATTGAATGTTTGTGTAATTTGTGATCCATGTAATTAGAATTTGCAGATCTTGAATTTTGTTTGTAATTTTCTAATCTAACTTACATAGATCAGGTATACTGTGTAGTTTGGACAGTTCATGAATTTGAAAAAGAAGAAAAATCAGAAATTTAAATCAGTATTTACATGCAGAACCTTGATTTGTGCTTCTTATGTAACTGTCTTACGATCGGCGCGATAGCGGTGCTATAGCGGCGGACGGAGCGGCAACCTGCCGCTATCGTGGAGGCGTCGCTTCACACTTCAATGTGGTTGCCGTCGCGTCACACTTCAGTGTGGCTGCCGTCGCGGAAGGCATAGCGGCGCAATCACAAGCTGAATTGCGATCTGTTACGTCCGCTAGGTTGAAGAAGAAATCGAAATGACTAAAAAGCTCGTCAGTTTTAAAACGTTGAGTGATTTTTAAGAATATTATAGGGTTTTTCTTTTGACTAACTTTACCTGACTACTTCTCCCGTGCCTTTCGCTGTTATGTTGAATTGAATGTCATGGATTTTGAGTATTTTTTGTTGTTTTTCAAAATTTATATGCAAAAAGTATTCATCCTATTTCTATACATCACATTTTGAAATAGCTGTCTGCTTTTCGCTATACTGCTATAGTTGTTTTTGGGCAGGCCGCGACGCTCCACTATCCTGGATTTAAAAAACTACAAACACTTATTCTTTTCATATGCTTTAGAGGCTATATAAGAGAGAAAGTGTAAGTTTAAGGACTAAATTGAAAAAACTATAAACACTTATTCTTTTCATATGCTTTAGATGCTATATAAGAGAGAAAGTGTAAGTTTAAGGACTAAATTGAGGGTTTAGTTTACATGCAATTCCAATTGCATTAGAGGCTATAAAAGAGAGAAAGTGTAAGTTTAAGGACTAAATTGGGGTTTAGTTTACATGCAATACCAATTGCATGTGGGTTGTGGTTTGATTTTACAAGCCATTGAGTACTTGTTGTGTTAGTTTATACCAAAGCTTGGGTTGATTATTTTTTGTTGATGTCTTGATTTCTGTTGCTCAAGTGGTTGTGTGGTCTTTTCCATTCATTTTGAGAGTTGAATATTTTTTTGACAAAGAGAGTTGAATACTTGATAGCCTCCCTTATGAGAATTGTTTGAAATTATTCGTTTTGAGAGTTGAATACTTGATAGTATCCCGTATGAGAATTCTTTGAAATTGTTATGAGAAGCTAGAATTTTATATCTTCTGAATTTTAACGTATTGCACGTAGGTTTTGTGGTATATTCTAAGTCTGTGAATTTGTGTTTCGTGGAATATTCTAAGTCTGTGAATTTGTGTTTCAGAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF03911.19	Sec61_beta	34	73	1.70E-18

Gene family

Gene family	Subfamily
Transporter family	IISP

Gene Ontology

GO term	Description	Category
GO:0005784	Sec61 translocon complex	Cellular Component
GO:0031204	post-translational protein targeting to membrane, translocation	Biological Process
GO:0005085	guanyl-nucleotide exchange factor activity	Molecular Function
GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation	Biological Process

InterPro

InterPro term	Description
IPR030671	Protein transport Sec61-beta/Sbh
IPR016482	Protein transport protein SecG/Sec61-beta/Sbh

trEMBL

trEMBL term	Description
A0A2K3LSA5	_

SwissProt

SwissProt term	Description
SC61B_ARATH	Protein transport protein Sec61 subunit beta

KEGG

KO	Description	Enzyme
K09481	protein transport protein SEC61 subunit beta

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G60540	Preprotein translocase Sec, Sec61-beta subunit protein
Medicago sativa L.	MsG0480019275.01.T01	_
Oryza sativa L.	LOC_Os12g07490.1	protein transport protein Sec61 subunit beta, putative, expressed
Cucumis sativus L.	Csa020082	_
Glycyrrhiza uralensis Fisch.	Glyur000717s00025325.1	_
Codonopsis lanceolata	Cl_chr01_05640T	_
Arachis hypogaea L.	AH02G24400.1	Protein transport protein Sec61 subunit beta like

Expression pattern