Gene detail

Detail information of Am09G016170.1 Annotation

Gene ID	Annotation
Am09G016170.1	Nucleotide-diphospho-sugar transferases superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am09G016170.1	mRNA	Chr09	59762727	59765194	-

Sequences

CDS:

>Am09G016170.1
ATGGGTTCAACAGAAAGATCAAAGAAAAAAACCCTTTTATGGAAGAAAGCCATACTTCATTTTTCTCTATGTTTTGTTATGGGTTTCTTTACAGGTTTAGCTCCAACAGGTAAATCTTTTCTCTTTTCTAGCAAAATTATTGCAACCTCAAATGGAACAAATCAGTTTGTTGCACCTCAACCATCTCAAATATCACATGTCAAAACAAATAACAGAACTTGGAAAGCTCTACCACCAGTGAATAGCTTACCTAAGAGACATACAGTTCATGGCCAGAAAACAAAATTGCATGAAAAATCAGTGCCTCAATTGAATTCTAGAAGACTTGTAATCATTGTAACTCCAACAAGTACAAAACTACCTTATCAAGCAGTGTTTTTGAGAAGATTGGCAAATACTATAAAGCTTGTTCCTCAACCATTGCTTTGGATTGTTGTGGAAGCAAAAACAGATTCCTCTGAACTTTCGGATATATTAAGGAAAACTGGTATCATGTATAGACATGTGGTTTTCAGTGAAAATTTTACGGACTTAGATGCTGAATTGAATCATCAGAGAAATCTAGCACTTAGACACATTGAGCATCATAGATTAAGTGGGATTGTACACTTTGCTGGCCTTTCCAATGTTTATGATCTTCAATTCTTCCAACAGCTTAGAGATATTGAGGTGTTTGGGACATGGCCAACAGCACTATTACGTTCAAATAGAAAGAAAGTGATAATGGAAGGACCTGTTTGTGACTCGTCTCAAGTCATTGGATGGCATTTGAGGAATATGAAGAATGAGACAACTACTCCTCCCAATATTCATATTTCTAGTTTTGCATTCAATAGTTCCATCCTCTGGGACCCTGAGAGATGGGGTCGCACTTCCTCTGTTAAAGACACCTCTCAGAATTCAATCAAGTTCGTGAAGCAAGTAGTTCTAGAAGATGAGACTAAGTTAAAGGGAATTCCACCAGGGGACTGCTCCAAAATCATGCTCTGGCGTTTCAACTTTCCTGCTCCTGCCTTTTCAAATCACTAA

Protein:

Promoter(3k):

>AM09G016170.1
TAGGCAACGTCGCAGGTACCGGTCGGAATTGATAGGTTCTAGAATAGAGATTCAAGAGCTTCTGAGACTGATAGAATCAGAAAAGTATGTGTTGGAGCAGAAAAGTTGAGAACATGAATGTTGTTAGTGACATCATGTGGGCACATCCCAGTTTCATGATCGATTATAGGCTCATATACTTTTTTACTGCTGAGAGGTTCATATTCGGTGGGGAGGAGTGTTACCATGATCAGTATTGGGTTCGTGAAAGGAAATCGGTGGGTGCAGGTAATTAAGAAAACTTCTATTTTGAACATTATATTTAAAACTAAAATGTTGTAATAATATTTGATTTCTTTTTTGAAATACAGGTTAAATTGACTCATGAGTGTCAACTGCCTCCAATTGCTATTCGGTGGGAGCGTTTTGCATTAAATGGGACTAATTCATTATTGATACCATATTTAGGGCGTATCCAAATATGTAGGGCTTTAGCTCCGATTCTCGAATCACGGACTGATCCACCTGAAATTGTAGACTTAACAACTGACTTAGATTGTGATTGATGTAAATATTTTACGCTTTATATTGCAGTATAATTATAATATAATATATTTTTATAGTAATTATTAATTATAATATTTTAAAAAAATTGAAACAATTACGGATTTATCTATATATTTGATAAATCCATAATTAAATTTTCAACTACGAATTTATCTATTTAATAGATAAATCCGTATAAAAATTTAAAAATCCTAAACCTGTAAATCTGATAGGGGTAAAATGGGGATAAATGAAATTGGAGGAGTATAAGGGATCAACTGTGGGGGTAGAAAAATCACCATCCTTTGTATTTAGTAGCCCAAACCCACAAATATCTTCTTCGGGTTCGTCCGTAAAGCCCACAACTCTGAACGATTCAAACCTACTTCCCATTTGAACAAAAGCAACCTACTTACCATATGGCAAAAAGGCTCCTCCTCCCAAGTATCCAGGATAAAACCTGTGATGGGCACGAGACAGATAGCTAAATAGACACCCACGAGTAAAAGAAATGGGTAGTTACATTATCTGCCAATTAATGGGATGGTGGGGAAATAGGTACATGTACTTGCATCCATTGAACCCCAACATGTTCTTAAACCGATAAATTGCGGGTCAATTTAAGGTCGTGTTTAATTAATATCGGATTGGGTCGTTCCAAAATATAAGTAATATAATTTAAAAAATAGTTGTTATTACTTAAATTAAATATCTTATATTTGATAATGAATTTAATAGACAAATTCAGTAAAATTTCTATAAAAGTAATGTTAATGTAAGTTAAATTTTGTTAAAAATATATTCAGATATTTTTATTTTCAATAAAATATAACTATAGTTTCAATTACTATTGCTACTACTATCACTACAAGAAATGCGCGGACTATTAGTGGAAAAAATCTGCCGGAAAAGGCCAAAATCTGCCGGAAATTGGTTATTACGGGAGGATTTTTTCCGCCGGAAATTCGTTCGTAGGTAACGGTTTTCGGCGGAATTTCCGACGGATTTTTAAAATTTTTTTTTTTAAAAAATCCGCCGGTAATTCAAAAAATCCGCCGGAAATGTCGTCGGAAATTTACCGGCGGGTTTTTTGAATTACCGGCGGATTTTTAAAAAAAAATTAATTTTTTTTTCAAATTTTATATTTTAATTAAATAAGAAGTAATAAAAAATGAAGTAGAATATGAGAAAAAAATTATAGAGAATAGAATGAGAAGTAATAGAGAAATTAGAATGAATAAGAATGAAAGAGAGTATGGAAAAATAATATAGGAGAGAATAAGAATGAATAAGTGATAATGAATAAGAATAAATGAGAGTATGTGAATGAAGAAATAAGAAGAAGTGAGAAGGAAGAAGAAATGAGAAATATAGAAAAGAGATATGTAGAGATAGGTTCAACCCAAAACCATTGGATTGGGACAGGTTAGGATGAGTCATGCACACCCCTATGTGCATAGGTATAGGGTGGGTACGAGGGACAACTATTTGTACTCATCCTGCCCCATTGACATCACTAACCATACCTTTCTTCTCAGTTCACCTACCTACAATTGTATGGCTCAGGTCGTTCAGCGCTTCAAGTGGTTTGTGCTGATCGATCTAACACTTGAAAGTTCTTAATAGTGACTTGATCGTACCGATTCAGCCAAAAATAACAAATGTGGGTGCCTAAACTTTTTTGTTGATTTTCGCCCAACGAACATTGATCGAGTCATAGTGAGAACCATGCAAACATAGAGGAACGTGAAGTTCTATTAATAGGCGGTGGAGGTGGTCGTCATTGAAATTTAGAGCTATTTTCAAATATTTGACCATTATAAACCACCTAAAACATTAGAGCTATTTTCAAATATTTGACCATCATAAACCACTTAAAACATTAGACCACCCTAATCATCCCCTATGTTAATAACCAACAGCCAAAATATTCATCATCTCATAATTATTATGCCAAGAGATTCCACCAACAATGTTTGTGTATTCAGATTCCTCTAATTGTACTAGTGGTCAACTCCAAATTAAACCCCTAACACACTATAGCATGTAGCACATGTTGAATAATATTAGTTAAATGGACAGGTATAGGACACATATTATTATTGATAGATTGGTGCCATCCCAACTGCTATTTGGTGCAGATAGCAGCAACTCATCCTCTCACACTACCTATTCTTTTTTCATATTTTCATATATTACTTTTACTTCAAGTAACAGCCAATAGAACCCATTCCATATATCTCCAAACAAAAGCTAAGCATTTAGTTTGGCAGTACCAATCATAACCACAGTGGTTCCAACGTAACAAATATATAAATATTTATACCCCTAATTCCTAAAATACCTTAAAAGTTTATATTACATTATATTATATGACCCTCTTCTTCATTCTCTGTACCAACAACTAGTCATTTTTTTTGTTTCATTCCATTAAGGTTGTGTGTATCAGCTGGTCAATTTCAATTTTTGCAGAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF03360.19	Glyco_transf_43	130	333	3.50E-65

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT43

Gene Ontology

GO term	Description	Category
GO:0000139	Golgi membrane	Cellular Component
GO:0009834	plant-type secondary cell wall biogenesis	Biological Process
GO:0042285	xylosyltransferase activity	Molecular Function
GO:0071555	cell wall organization	Biological Process
GO:0090376	seed trichome differentiation	Biological Process

InterPro

InterPro term	Description
IPR029044	Nucleotide-diphospho-sugar transferases
IPR005027	Glycosyl transferase, family 43

trEMBL

trEMBL term	Description
A0A1S2XSS2	_

SwissProt

SwissProt term	Description
IRX9_ARATH	Beta-1,4-xylosyltransferase IRX9

KEGG

KO	Description	Enzyme
K20869	putative beta-1,4-xylosyltransferase IRX9	[EC: 2.4.2.-]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G37090	Nucleotide-diphospho-sugar transferases superfamily protein
Medicago sativa L.	MsG0780040906.01.T01	_
Oryza sativa L.	LOC_Os03g17850.1	glycosyltransferase family 43 protein, putative, expressed
Cucumis sativus L.	Csa004733	_
Glycyrrhiza uralensis Fisch.	Glyur000081s00006768.1	_
Codonopsis lanceolata	Cl_C01234_unscaffolded_00040T	_
Arachis hypogaea L.	AH16G17540.1	Probable beta-1,4-xylosyltransferase IRX9 like

Expression pattern