Gene detail

Detail information of Am09G015910.1 Annotation

Gene ID	Annotation
Am09G015910.1	ABC-2 type transporter family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am09G015910.1	mRNA	Chr09	59224054	59226777	+

Sequences

CDS:

>Am09G015910.1
ATGTCTCGCCTAGCACCCACACCTGCCAAAAAACCACCCACACCTCCCAACGACGATAGGCTTCCTTTCTTTAACCAATCAATGGAGCTTGTTCAACTACCTAACCCTCTCAGATCCCGATCCCTTGGAGAGCTTCTCAAACACGTTGAAGATGCTCAAAACGACAACATTTCTAACAAAAACGACAATCACCATGTTCTCGACCTCTGCTCCTCTTCCACCACCCTTCCCTCTCATCCTTTTTTTCTTTCTTTCACCAACTTAACTTACAGCGTCAAGCTCCAACGGAAGATAACTCTTCCCCCTTGCTTTTCCACTAACAAAAACTCTCAGCCATTAAACGACGATGCCGAAACCAAACCAAACGGCACCAAAATTCTCCTCAACCAAATCTCCGGCGAAGCTCGTGACGGTGAGATCATGGCGGTTCTTGGCGCCAGTGGCTCCGGCAAGTCAACACTGATAGACGCTCTCGCCTATAGAATCTCCAAGGAGAGCCTAAAAGGCACAGTGACACTAAACGGCGACGTTTTGGAGTCCAGTCTTCAGAAAGTGATTTCCGCTTACGTCATGCAAGATGACCTCCTCTTCCCCATGCTCACCGTTGAAGAAACTCTCATGTTCTCAGCAGAATTCAGACTCCCTCGTTCACTCTCCAAGTCCAAGAAGAAGGCTCGTGTACAAGCCCTAATCGACCAGCTTGGTCTCCGCAACGCCGCCGGAACCGTAATCGGAGACGAAGGCCATCGCGGTGTCTCCGGCGGTGAACGCCGCCGTGTCTCAATCGGAATTGACATAATCCACGATCCAATCATTTTATTCTTAGACGAACCAACCTCCGGTCTCGACTCCACCAGCGCCTACATGGTAGTCAAAGTCTTGCAGCGAATTGCACAAAGCGGAAGCATAGTGATCATGTCCGTTCATCAACCTAGCTACAGAATTCTTAGCTTGCTTGACCGTTTGATCTTCCTTTCACACGGTCAAACCGTCTACAGCGGTTCTCCGGTGAACCTCCCGCTCTTCTTTGGGGAATTCGGTCACCCAATACCGGAAAACGAGAACCGTACGGAATTCGCACTTGACCTAATTCGTGAACTTGAACAAACCCCTGGCGAAACAAAAAGGTTAGTAGAGTTCAACAAATCGTGGCAGTTGAAGAACAAAGAGAAACGCGAAAAAATTAACGGACCTAAAGTATCATTAAAAGACGCCATCAGTGCTAGTATCTCAAGAGGGAAACTAGTTTCTGGCACTAACGGAAACTCAACGTCAAATGCGTCGTCAGTTCCCACGTTTGCTAATCCGTTTTGGATAGAAATGGCGGTTATAGGAAAACGCTCTCTAACAAACTCAAGAAGAATGCCTGAATTATTCGGAATCCGGTTAGGTGCAGTTCTTGTAACCGGAGGGATCTTAGCCACCATGTTTTGGCGGTTAGATAATTCACCAAAAGGAGTTCAAGAGCGTTTGGGTTTCTTCGCTTTCGCTATGTCAACCACGTTCTACACATGCGCTGAAGCGATTCCCGTTTTCCTTCAAGAGCGTTACATCTTCATGAGAGAAACCGCTTACAACGCTTACCGTCGTTCTTCCTATGTTCTCGCTCACTCCATCATCTCACTCCCTTCTATTATTTTCCTCTCCTTCGCTTTCGCCGTCACCACCTTCTGGTCGGTAGGTCTCGCCGGCGGGACATCGGGCTTTCTCTTTTACTTTTTCACCATTGTAGCTTCTTTCTGGGCGGGTAGCTCCTTCGTGACGTTCCTTTCCGGTGTAGTTTCTCACGTGATGCTTGGTTTCACGGTGGTGGTAGCTATTATGGCTTACTTTTTACTCTTCAGTGGTTTCTTCATAAGCAGGGATAGGATTCCAATGTACTGGATATGGTTTCATTATTTGTCGCTTGTGAAGTATCCTTATGAAGGAGTGCTTCAGAATGAGTTTGATTTAAATCCACCGAGGTGTTTTGTAAGGGGGATTCAGATGTTTGATAATACGCCGCTTGGCGATGTGGGGGCGAGCTTGAAAGTGGAGCTGTTGAAGAGTCTGAGCAAAACGTTGGGAATTAATATTACTAGCTCTACCTGCGTTGTCACCGGAGCGGATATACTGAAACAGCAAGGGGTTACGCAGCTTAGTAAATGGAACTGCTTGTGGATTACCATTGCTTGGGGTTTCTTCTTTCGATTCCTTTTTTACTTGGCTTTGTTGTTTGGAAGTAAGAACAAGAGGAACTAG

Protein:

Promoter(3k):

>AM09G015910.1
ACCTCCTAAGAGGAGGCGTAATCGTGAGGTGGTACTTAATATTGGGAATATGAGGGGTCATGTGTTTGTGGGCCCACCAGCTACCGCTCCGATTGCCCCACAACCTCCGCCTCCATCTGGCCCCGGATGGTATCATTTACCATCACGTACAAGGGCATTATATGGGCCCACCAAATGCGTATGCAGCAGGGCATATGGGCACACCAGCTGGGTATATGGGCACACCAGCTGGGCATATGGGCACACCAGCTGGGCATATAGGCTCATCATCTAGACATATGGGCCCCATAGCTGGGTTATCTATGCCTACACCAGAGCCCCAGGATGATATTGAGCATGATATTGGTGGTGGTAATGTTGATTTTGATTCATCGACCGATGACGAGAGAGTGGAGGTGGTTGTTATTAATGGTGTCAGACTCAAAGTCATCTATAGTCGTGGTAACGCGTAAGTATTATATTGTTTGTTTTTTTTTAAGTTAATTATGCAACGACTTATATATATTTGATTGTTTGATATATCTTTCATTATGCAGACTTCTTCCTGCAAAGGCAGCTTCATCAAGCATCAATCATGTCATCCGCAAAAGATATTTTCAAAAGTTCCATAAAAAGTGGAGTAAAGTCGATGAAAAAGACAGGAATGATCTGCTGGACTTCTTTAGTGTCAATTATTTTGTCATTACTTATATTGTTAGTTTAAATTTTATGTTTAATAATGTTTAATATAATTACCAATACATATTTTCAGTTTACTTAATACAGACCAAAGTGACATGGGACATAGAAGATGATGACAATGTGCAGAGACTTTTTTTTAAAAGGATGGGGCGCTCAAATATCAGATTTGCTTTATAAGTTGCGGTGTAAAGATAAGAAGCCTAACTACATGAGTGATGAAATTTGGAATGCCTTCAAGGGCCATTGGGCTACAGAGACTTTCAAGAAAAATGCTGCAAAAGCCAAGAATAATAGAAACTCAGAAAAGGGTGGCTCACTTCACTGCGGCGGGTCCATCAACCAGGCTCAGCATGCTTCTAGATTGGTAAATTATTTTTAAAATCTGTGTGTTTTTTTACATTAGTTAATTAGTTAGCATTTTTTGAAAATGTGTTTCATTTTACAGAGTAAGAAGGCAGGACGCCCTATCACTGCTCCTGAGCTGCATAGAGCCACCCATGTGAGGAAAGGCACTGGCGAGTATGTTGATGAGCGCTCCAGGATGACTCAGGTAAATATACAACTTGATTTGTATTATATAATGTTGCTTTGTCAAAATGGAGCGCTAATTTGCGGTTATTCAAAACAGGAGCAAATAAATGAGATCATGACTCAGCTGACACAGGGGAGCTGGGACCCTGAATCACTTGGCCAACTTACTTCTGAGATGATAGATCTGACAAACAAAAATTGAGAGAAGACAGTAGGTTGTTCTAAGGGTCGCCTGTATGGTATGGGGCCCTTGACTCCGAGTATGGGCCAGTATGTGGCCGGGAGCAGCAGAAGACGCAGTCGACCAGCTTCTACTCCTGCGGAGACAGAGCATATTAGGCAGCTGGAGCAGGAGCTACTGTCTACTCGACATGAGTTGCACGATACTCAACAGGAGGTCAGGACCTCTACTGAGGCTATGAAAAAGATGCAGGAAGACTTTGCGAAGGTGACCCGTAGGCAGGAGTTGATGTTTAGGTATTTTAAGAATATGCAGCAAGATGAGCAGCGAGATGAGGAGCAAGATGAGGAGCAAGCTGAGGAGTCTGGGGAGTCTGGGGTGTCTGGAGAGGCTGGGGAGGCCGAGGAGTCTGATGGCAGCACCTTTTAGGATTTGTTGTATCAGTTTGACAGTTCAATATTTTGTTATAACATTTCATATTAAGTGTTGTTGATTCGAATTTTATGTTATTGAAGAATTTTATTCTCGGAATTTTTATTTTAAACTGTTTTATGTATTTTAGATTTTATTATTTATTATTAAAATAAACAGGTATAAAAGCAGGTTTATAAAAAAAATTCAATCAGTTGGGCATTAGCGACGAAATTAGCGAGGGAAATTGGACGCGTGACTATCAGAATTTAACCACGTGGCTGTCTTTAGTAGCGAGGGAATTATAATCCATCGCTAATTAGCGATGGATTCAAATTCCCTCGCTAATCCCATTAGCGAGGAGGGAATTAGCGAGGGAACCAGTCTGTCGCTAATTCCCTCGCAAATGACCATTAGCGATGGACTTAGGTCATTTTGCGAAGGAAATTTCCCTCGCTAATGACCAATTTTTTTGTAGTGCTATATGCAATGTATGGCATGGAAATGAGAGCGGATGGGTTCAGGTACCGACGATTTCAAATAGCCAAACCGCACCCGCCTGCGTCTACCCATATGAAGATGAGATCATCGACCCAATGAACCGTAAACCCGCAATTATCCGCAGGTGAATCAAAATTTTGGTTCGGTTTGTTCGGACTTTGTTCAACCCAAAGTTTTTGTCCAGCCCTAGCCCCTCACCCATAATTATACATAGAAGAAATTTTGCTTGTTACAAAAAATAAAGATATTAGCTAGTGAATAAATTAAAAATGGATCCAAAAAAGTAAGATAAACACATTACAATTTATTAATTACGTGATAAATTTGTTAATCGCAATACAATTTTGGCTGAGCAAAGGTCAAATGATAAACGCATAAAGGGTGATGATTTAAGGTGACAATAATTAAGTTCTAAATATATGAGTTATCTGAGTTCTTAAGGCTTGGCAGTAAGTGGTAACACAGCGTCACAAAGCTATCTAATAGGTAGCAAATGTCAAAACTCCTCTCACCTGCACATGCACCTGCTAATGATGCTTCCTAGTTGAATTAAGCAACGTTTGGAGTTGAAATTCAACTCTCTAACTACCAAACACCCACTCTCACCGTATATAAATATCCATTCTCTTCAAACCATCCCATCCCATCACATGAATGAATGAACGACATATATACATGCAAATGCAATTCTACGA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01061.27	ABC2_membrane	443	649	2.40E-39
PF00005.30	ABC_tran	128	280	6.60E-24
PF19055.3	ABC2_membrane_7	309	442	1.10E-07

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0015849	organic acid transport	Biological Process
GO:0005524	ATP binding	Molecular Function
GO:0008270	zinc ion binding	Molecular Function
GO:0009055	electron transfer activity	Molecular Function
GO:0003676	nucleic acid binding	Molecular Function

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR013525	ABC-2 type transporter
IPR017871	ABC transporter-like, conserved site
IPR003439	ABC transporter-like, ATP-binding domain
IPR043926	ABC transporter family G domain
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A1S2XTW3	_

SwissProt

SwissProt term	Description
AB2G_ARATH	ABC transporter G family member 2

KEGG

KO	Description	Enzyme
K05681	ATP-binding cassette, subfamily G (WHITE), member 2

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G37360	ABC-2 type transporter family protein
Medicago sativa L.	MsG0780040878.01.T01	_
Oryza sativa L.	LOC_Os03g17350.1	white-brown complex homolog protein, putative, expressed
Cucumis sativus L.	Csa020433	_
Glycyrrhiza uralensis Fisch.	Glyur000842s00023839.1	_
Codonopsis lanceolata	Cl_chr05_38080T	_
Arachis hypogaea L.	AH06G14250.1	ABC transporter G family member 2 like

Expression pattern