Detail information of Am09G015410.1 Annotation
Gene IDAnnotation
Am09G015410.1 phytochrome interacting factor 3-like 5
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am09G015410.1mRNAChr095752970457534984+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF00010.29HLH2913378.10E-14
Gene family
Gene familySubfamily
Transcription Factors FamilybHLH

Gene Ontology
GO termDescriptionCategory
GO:0005634nucleusCellular Component
GO:0003700DNA-binding transcription factor activityMolecular Function
GO:0003677DNA bindingMolecular Function
GO:0016020membraneCellular Component
GO:0006355regulation of DNA-templated transcriptionBiological Process

InterPro
InterPro termDescription
IPR047265Transcription factor PIF1-like, basic helix-loop-helix domain
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638Helix-loop-helix DNA-binding domain superfamily
IPR031066Basic helix-loop-helix (bHLH) transcription factors ALC-like, plant

trEMBL
trEMBL termDescription
A0A2K3PS00 _

SwissProt
SwissProt termDescription
PIF1_ARATHTranscription factor PIF1

KEGG
KODescriptionEnzyme
K16189phytochrome-interacting factor 4

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT2G20180 phytochrome interacting factor 3-like 5
Medicago sativa L.MsG0780040838.01.T01 _
Oryza sativa L.LOC_Os12g41650.2helix-loop-helix DNA-binding domain containing protein, expressed
Cucumis sativus L.Csa007205 _
Glycyrrhiza uralensis Fisch.Glyur000054s00005354.2 _
Codonopsis lanceolataCl_chr06_35010T _
Arachis hypogaea L.AH12G12850.1Transcription factor PIF1 like

Expression pattern