Gene detail

Detail information of Am09G013510.1 Annotation

Gene ID	Annotation
Am09G013510.1	BTB-POZ and MATH domain 2

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am09G013510.1	mRNA	Chr09	52307378	52312913	+

Sequences

CDS:

>Am09G013510.1
ATGGGTAAGATTCTCCGAGAAACCGCAAAGCCATCCTCTAACCCATGGTCTCCGTCTTCCTCTTCGACACCAGCGACTACTTTGTCGACGTCGATCACGGAAACGGTGAAGGGTTCTCACCAATTTAAGATCTCGGGGTACTCGTTGTCGAAAGGGATCGGAATTGGGAAATACGTAGCGTCCGATATATTTTCGGTGGGTGGGTACGATTGGGCTATCTATTTTTACCCTGATGGGAAGAGCGTTGAGGACAATGCTACCTATGTGTCACTCTTCATCGCGCTCGCTAGCGATGGCACCGACGTTAGGGCTCTTTTTGAGTTAACCCTTTTGGATCAGAGTGGGAAGGAGAGGCATAAGGTTCATAGCCATTTTGAGAGGACTCTTGAAAGCGGACCTTACACCTTAAAATACCGCGGTAGTATGTGGGGTTACAAGCGGTTTTTTAAGAGAACAGCTCTAGAGACATCAGACTACCTTAAAGATGATTGCCTCTCTGTGAATTGTAGTGTTGGTGTTGTGAGGTCACACACAGAAGGCCCCAAAATATATTCCATAGCAATACAACCTTCTAACATTGGTCAGCAATTTGGGCAACTGCTGGAAAGTGGAAAAGGAAGTGATGTGAGTTTTGAAGTGGATGGGGAAATTTTCGCTGCTCATAAATTGGTATTAGCAGCTCGTTCACCTGTTTTCAGAGCCCAGCTTTTTGGTCCTATGAAAGATCAGAATACACAAAGTATTAAAGTTGAAGACATGGAGGCTCCAGTTTTTAAGGCATTGCTTCATTTTATATACTGGGACTCACTGCCTGACATGCAAGAGCTTACTGGGTTGAACTCGAAATGGGCAACAACCTTGATGGCTCAGCATCTTCTAGCGGCAGCTGATCGGTATGCCTTGGAGAGGCTTAGGCTGATATGTGAAGCAAGCCTCTGTGAAGATGTAGCAATAAATACTGTGGCTACAACTTTAGCCTTGGCAGAGCAGCACCATTGTTTCCAGCTGAAAGCTGTTTGTCTCAAGTTTGTTGCCACCTCCGAAAATCTCAGAGCTGTGATGCAGACTGATGGATTTGAGTACTTGAAGGAAAGTTGCCCCTCTGTTCTGACTGAACTGCTGCAGTACGTGGCTAGATTTACTGAGCATTCGGACTACATGTGCAAGCATAGGAATGAAGCAATACTTGATGGCAGCGACATAAATGGGAGGCGGGTGAAGCCAAGGCTTTAG

Protein:

Promoter(3k):

>AM09G013510.1
ATATTTTATTGTAATTTTTAAATATAGCATAACAATATAGATTCTTTTGTAAGTAAGTCAAAGAATTAATTAGATTTGAGCTAGTAAGTGAGTGAGAGTTGGGTTTTAGTTGTATTTGGGCTAGTAAGTTAGTAAGGAATGTTGTAAGTTAATAAGCCTTAGTGTTACTTGCGGTTTGGTTTGGTTCGGTTTCTGTAATCGAAACCGCGAACCGAACCGCGCGGTGCACTGAAAAAAGAAACCGAACCGAACCAATAAGAAGCGTTTTTTGCGGTTTTCTGTTTGGTTTGGTTTGCAGTTTTCTATTGGTTTGGTTCGGTTTTGAACACTCCTATCCATAACAAATGAAAAGTATTAAATTGATCTCGATTATCTAAAATGTCAATTAGATTATTAATCCCTTTTGAGCTAACTTTTTGGGGAATTTCAATCTCTTCTAGAACTAATTTGTTCAATATTTTAGATTTTTTATGACTAAATAAGTACTTTAAATTTCGTAGGGCCAAATATGTCATTGTAATTGTTATCAAATATCAGTTTAAGCCCTTATTCTAAAAAAATATTATCTAATGGGAGCAACACTTATATTTTCATGGGGAAAAAACTCTTTTATTAAATATATTCAACCAAAATAAATTTACCTATATAGTGTGGAAAATTGCCCCCATATCCTTCAAGGTAGACATGCCTTTGTATGTGCACAAACACATGCACAAGTATATAAAAATACATTACACTTCTCATAGTTTGTTATATAATTTTTTTCAAAGGAAAAAATAAATAATACTATGAAAATATTTTTATAGAAAAATATTTACGACTCGGTCCCGAAAAGCTCGAAGGCCGTATTGGGCAACAAATTTTGAGCCAATAAATTCTCGAGCATCTTGGCCCAACCTAAACTGGCTCTGGGCTAGCCTAATGTAGGTTGGGTAGCTTGTTATGTTAACTATAATCTTGTGTTTGATGCACACCTGATAACTAACATTGTAATCAGGGACGGATCTAGGTGTTGTTAATTGGGGGCATTTGCCCCCACTTGAAAAATTATTTTGGTTGGGAATATATATAACAAATTTATTTTGCCCCCATAAAAAAATAAAGGTTGCCCCCATAAGATAAATTAAATGTAGAAATTCATAAGACATAAATAAAAAGGAACGTAAATTGGTACTAATTTTATCTTTTTAGCTATGTATTTATAGAAATTTAGGTATTTTAAGGTTTCTTTGTAATGAAATTATGTTCTTTGTAAAGTTTATAATAATTTTTTTAAGAAAATTTTATAGGCTATTTTTTTTGCCCCCACTAGTGAAAATTTCTGGATCCGTCCCTGATTGTAATAGTGTATTATTCTATTTACCAAATAACAGTATAAAATGATATAACTAATCCAAAATGACATTTACCAAAAAAAACTAATCCAAAATGACAACATCACTCATATGACACATTTATAGATAAATTTTTAAAAATATCCTTTTTGTATTTTTTATTAATTTAAATTTGTAATTTTAGATATAGATTCCTTAATTTTAGTTTTTATTTTAAATTCTTAATATTTTCTTGATTTGTATTGTATATTTTTACTTTAATTAATTTTTATAATATACAATAATATTAATATTTTTAGCCTTTATTTTTATTTTTTAATATATATTATTTTATTTTCTACAGTTTTTTTTGATAATTTTAGTTTTTTTCTTTTAAAAATCAATATAATTATTATTGCTGTTAAAAATAGATATTACGAACTTTATTATTTTTAATAATTTCTTATTCATTATATTTTATAATTTTTATGGCTGAACACCAAAAATAATTTTTTACTATCTTTTTTTTTGTTTCTAACTCAGCCTTCTATCATGATACAGGTACGGATGTACAGTAGAATAAGTGACATGATAGAAATTTTCTATCATGTTAGCTCAATAAACACTAAATTAAGACAAAATTTGCAACATAGTCTTCCACTACCTTAACAAACACGAGAACTATTCTACTTCTACCACTTATTCCATTTACATTTATGCTATAATTGGTATCAAGTTGGACTTGTCATGAATAACCATTTACCATAAAGTTCACATGTTGTGGCTTCAGCACAAACTCGCAAATAAAGCTAATCTGGCGTGATTCTGAATACATTATGTTTCGTATCGTATCACGTTGGACTTGTTGTGAATAACCTTTACCATAAAGTGTGTGTTTGGTATCGCGTCAGATACCCCTTAAATTCACGTCCAAGTCACAACTCCAAGTTATGGAGATGACAAACACAGAAACAAACACACTTAGCTTCAACACGAAGGTTGGACTATTGCCAATTTGACATGATTCCAAACTAGCACCTGATATCCTTCATGTTTGAAGCATCACCAACTGGGGAGGGACTCTCTCCTACAATTTTTTTATTAGACATGATCAAGTGTTATATCTCCACCATTCAATTTCGCTCTTTATTAATTGTTTTATTCAATCGACGAATAGTAGTATCCTCTCTCACCAACCAAATGAGCATATGCACACTTCACAGGCAAAGTTACCATTAACGGAAAAAGTAGTTAATGCTTTACTGATGTCACAACTTTTACTATTTACCGTTAGGGGACACGTGTTTGTATAAGAAAACGAGTCGTTCGAGACAGGTAGATGCAAGTCTCATCGATAATTCCATTTTCACCGAAAAACAATCGAAAAACTTATTTAAACCCGTCATTGCTTCAAGCCTTTATCCGTCTTTTCAATTTTGAGTCTTCTGCCTCTCTCTCTCTCTCTAAAATCGTTTCAAACCCTAGAAATTCTTTCTCCAGAGTCTGAAAAATTTCCTCAACAGTCTTAAATTTTCGCATCAAACCCTCACTTCCCAAAATCAGATATCCAATTCGTACCCCGATTTGACGCAATTCCAAATCTCTTCGTTTTCTTAATTCCCTCGATCGACAGCGTTTCCGCGCGATTGAATTAAAAAATCCCCGATTCCGTTACGGTGGCTCTCGC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00651.34	BTB	198	314	1.70E-26

Gene family

Gene family	Subfamily
Ubiquitin Family	BTB

Gene Ontology

GO term	Description	Category
GO:0071472	cellular response to salt stress	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0003723	RNA binding	Molecular Function
GO:0016567	protein ubiquitination	Biological Process
GO:0006397	mRNA processing	Biological Process

InterPro

InterPro term	Description
IPR008974	TRAF-like
IPR011333	SKP1/BTB/POZ domain superfamily
IPR002083	MATH/TRAF domain
IPR000210	BTB/POZ domain
IPR045005	BTB/POZ and MATH domain-containing protein 1-6
IPR034090	BPM, C-terminal

trEMBL

trEMBL term	Description
A0A072U1Y3	_

SwissProt

SwissProt term	Description
BPM2_ARATH	BTB/POZ and MATH domain-containing protein 2

KEGG

KO	Description	Enzyme
K10523	speckle-type POZ protein

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G06190	BTB-POZ and MATH domain 2
Medicago sativa L.	MsG0180004003.01.T01	_
Oryza sativa L.	LOC_Os07g46160.1	MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
Cucumis sativus L.	Csa024911	_
Glycyrrhiza uralensis Fisch.	Glyur000158s00011351.1	_
Codonopsis lanceolata	Cl_chr06_40980T	_
Arachis hypogaea L.	AH16G02870.1	BTB/POZ and MATH domain-containing protein 2 like

Expression pattern