| Gene ID | Annotation |
|---|---|
| Am09G013040.1 | RING/U-box superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am09G013040.1 | mRNA | Chr09 | 50840200 | 50842777 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13923.9 | zf-C3HC4_2 | 158 | 198 | 1.50E-08 |
| PF13639.9 | zf-RING_2 | 157 | 199 | 4.80E-08 |
| PF13920.9 | zf-C3HC4_3 | 157 | 202 | 9.90E-08 |
| PF00097.28 | zf-C3HC4 | 158 | 198 | 1.10E-07 |
| PF13445.9 | zf-RING_UBOX | 158 | 186 | 2.10E-07 |
| PF15227.9 | zf-C3HC4_4 | 158 | 198 | 8.10E-07 |
| PF14634.9 | zf-RING_5 | 158 | 199 | 1.20E-06 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | RING |
| GO term | Description | Category |
|---|---|---|
| GO:0016567 | protein ubiquitination | Biological Process |
| GO:0046872 | metal ion binding | Molecular Function |
| GO:0036503 | ERAD pathway | Biological Process |
| GO:0004839 | ubiquitin activating enzyme activity | Molecular Function |
| GO:0004386 | helicase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR017907 | Zinc finger, RING-type, conserved site |
| IPR001841 | Zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR045103 | E3 ubiquitin-protein ligase RNF5/RNF185-like |
| trEMBL term | Description |
|---|---|
| A0A2Z6N602 | _ |
| SwissProt term | Description |
|---|---|
| RNF5_HUMAN | E3 ubiquitin-protein ligase RNF5 |
| KO | Description | Enzyme |
|---|---|---|
| K10666 | E3 ubiquitin-protein ligase RNF5/185 | [EC: 2.3.2.27] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G58030 | RING/U-box superfamily protein |
| Medicago sativa L. | MsG0780040593.01.T01 | _ |
| Oryza sativa L. | LOC_Os08g06510.1 | zinc finger, C3HC4 type domain containing protein, expressed |
| Cucumis sativus L. | Csa002475 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000788s00032587.1 | _ |
| Codonopsis lanceolata | Cl_chr04_47450T | _ |
| Arachis hypogaea L. | AH16G03510.2 | E3 ubiquitin-protein ligase RNF5 like |