Detail information of Am09G012360.1 Annotation
Gene IDAnnotation
Am09G012360.1 mitochondrial RNAediting factor 1
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am09G012360.1mRNAChr094881370248817826-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF14432.9DYW_deaminase5035952.40E-40
PF12854.10PPR_13553868.80E-22
PF20431.1E_motif4054672.30E-13
PF17177.7PPR_long2953872.30E-08
PF20430.1Eplus_motif4724992.30E-06
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0009451RNA modificationBiological Process
GO:0008270zinc ion bindingMolecular Function
GO:0043231intracellular membrane-bounded organelleCellular Component
GO:0003723RNA bindingMolecular Function
GO:0004519endonuclease activityMolecular Function

InterPro
InterPro termDescription
IPR011990Tetratricopeptide-like helical domain superfamily
IPR046960Pentatricopeptide repeat-containing protein At4g14850-like, plant
IPR002885Pentatricopeptide repeat
IPR046849E+ motif
IPR046848E motif
IPR032867DYW domain

trEMBL
trEMBL termDescription
A0A9D4XQT2 _

SwissProt
SwissProt termDescription
PP429_ARATHPutative pentatricopeptide repeat-containing protein At5g52630

KEGG
KODescriptionEnzyme
K23541Ca2+/H+ antiporter, TMEM165/GDT1 family

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G52630 mitochondrial RNAediting factor 1
Medicago sativa L.MsG0780040524.01.T03 _
Oryza sativa L.LOC_Os01g46230.1tetratricopeptide-like helical, putative, expressed
Cucumis sativus L.Csa002627 _
Glycyrrhiza uralensis Fisch.Glyur000206s00012564.1 _
Codonopsis lanceolataCl_chr04_47330T _
Arachis hypogaea L.AH12G09630.1Putative pentatricopeptide repeat-containing protein At5g52630 like

Expression pattern