Gene detail

Detail information of Am09G012220.1 Annotation

Gene ID	Annotation
Am09G012220.1	transmembrane kinase 1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am09G012220.1	mRNA	Chr09	48269986	48273395	+

Sequences

CDS:

>Am09G012220.1
ATGGCCCAAGTGAGAGTCAAAAGTAGTTTAATTTTCATCTTCTCAACAATCCTCTTTGTGGCCATTGCTGAGGACGACGGCGACGACACAGTTTACATGTCTCAGCTTTTGAATGCACTGACTCCAACTACTCCCCCGAGTTGGTCTAATAATACCCACTTCTGCAAATGGAGTGGCATTGTTTGCAATGAATCCAATAGTCGCGTCCAGTCCATCATACTTCCACACAGTTCACTCACTGGGACAATCCCATCGATTCCCGAATTAGATTTCAACTCCCTCACCAATCTCACCCTCATCGATCTCCACAACAATTCACTCACTGGACCTGTGCCTCTACTTGCCAAATTTAGGGGGCTCGAAACTGTGCTCCTCGGCGACAACAACTTCACCTCCTTGCCACACAGTTGGTATAGAGGACAACAGTTGAGAACCCTAAACCTTAGCAACAACTTGAATTTGATACCTTGGTTGTTTCCTAGTGATTGGGTTGAGTCTCCGTTGCTACACACCCTGGACCTGGAAGCAACAAATATCATTGGCTCCTTGTCGTCGAGCGTGTTCGACTGGTTTCCAAAACTAGAGACTATTGTTCTTTCTTACAACAATATTAGTGGAGATCTGCCAGAGTCTCTTGGGAGATCTGCAATAAGGTATTTGAAGGTCAATAACCAAGGGTATTGGAATCAATTTACAGGTACTATTGACGTGATTTCGTCAATGACGTTATTGTCTCAGGCATGGCTTCACAGAAACGCGCTTTCAGGACCAATTCCTGACTTATCCAATTGCACCCATTTGTTGGATCTGCAACTCCACTCAAATAATTTCTTTGGTATGGTACCGCCTTCGTTGATGGGCCTCTCTAGCTTGAAGAGTGTTTCATTGGATGACAATATGTTTCAAGGGCCAAAACCGGTGTTTCGTAAGGATGTGAGGGCAAGTTGGGGAGGAATGAATAGCTTTTGTGATGAGCGCCCTTGCGATCCGCAGCTGGCGACTTTGCTTGTAATCGCTGAAGCTTTTTTGAATCCTAACTTTTTGGTGCTCCATGGATGGACGGGGAGTTATCCTTGTGAGGACGCATACTCATATATTATGTGTACAGGAGAGACTATTACTAGTGTTAACTTGACCGGCCTCAATTTAAGTGGTGGAACTATATCCCCTGCATTTTCTAATTTAACCGGATTGGTCAACTTGACTTTGTCTGGTAATAATTTGACGGGCTTAATACCCCAAATCCTCACAACTTTGCCCCAACTCAAACTTCTGGATCTCTCCAATAATATCCTATCCGGACAAATTCCCAATTTTTCATTAAAGGTCAAGTTAAATACAACAGGTAATGCCTTTCTTGGCCGCAAAACTAATGATGATGCACTAACTGGTGGCCCATCTAAAACAACAAATCCTGCTTCACTTAGCCCTATTTGGATAGCAGCAGGGTCATTATTAGTGTTTTCCGTTGGAGTTGCAATTCTAGTTTTGATTATTTGTAAATACAAGAGATATCTTGGTTTAGTACAAAAAAGGATCTTCAGGAAAACTAGAAAACATCTTGACGACAATGTGGAGGGTTTCATAAAAACTTATAATTTGTCGGTGCCAAAGCGATATAGTTATGTAGAGGTCAAAAGAATCACAAACTCGTTTCGAGATAAATTAGGTCAAGGAGGATATGGTGTTGTGTACAAAGCAAGCTTACCCGATGGTCGTCAAGTAGCAGTGAAATTGATCAATGAGTCCAAAGGAGATGGTGAAGAGTTCATAAATGAAGTTGCTAGCATAAGTAGAACATCACATGTCAACATTGTCGCACTTTTGGGTTTTTGCTATGAGAAGAATAAAAGAGCATTGATATATGAATTCATGATTAACGGTTCATTGGATAGGTTCATTTATAGAAGAGGGTTTCCAAGTGCGATTTGTAGCTTGGATTGGAATGCATTGTACCATATTGTTGTCGGCATTGCTCGTGGACTAGAATACTTGCATCAAGGATGTATTTCAAGGATCTTACATCTTGATATCAAACCTCAAAACATTCTTTTGGATGAAGATTTTTGCCCAAAAATCTCTGATTTTGGATTAGCGAAAATATGCCAAAAGAAGGATAGTATTGTGTCTATACTAGGCACAAGAGGAACTATAGGATTCATAGCACCAGAAGTGTTCAGCCGAGCTTATGGTGGAGTTTCTCATAAGTCGGATGTATACAGTTACGGCATGTTGGTTCTAGAAATTGTAGGAGGAAAAAAGAATTATGATACTGGAGGATCTTGTAGTTCCGAGACGTACTTTCCCGATTGGATTTATAAGGATCTTGAGCTAAGTCATAACCTTGAAAATCGTTCAGGAGTCTCAGAGGAAGAAAATGATATGATAAGAAAGATTACTATGGTGAGTCTATGGTGCATTCAAACGAATAGATTAGATAGACCATCGATGAGTAAAGTAATAGAAATGTTACAAGGTCCACTCCAGGATACGCCATATCCTCCAAAGCCTGTTTTATGTTCTCCTAAAAGAGCATCGTTGCACTTTTCATGCATGTCTTCCAACAATTTGTCAGCGACCAATTCAATAACCATACATGAAGATGATCCATAG

Protein:

Promoter(3k):

>AM09G012220.1
GAAAACATTTTAACTTTATTTTATCTTTTATTATAGAAGTAACTTATACATAAGCACTCATATGATAATCGCTTATGCTATAATCATTTAATTAAGCTGTTTACAAAAACAGCGACTCAATAATCCAAAATTTGATATAGGTACATTTTCAGAAATCCATTAATATTGAAAACCCCATCATGAAGTTGAGAAGTCAAAATACTTATCTGAATAAACCAAGGTAAGCAGCAACCTGATAGGGCTTTTCAGTAAGTTCTCAACTTGATAGAAACTTCAATGCAGTTTTTGTTTGCAAAATAGTACTCCTACTTAAGAAAATAAGCCTCAATTTATTTCCGGCAAATTCAGTGATTTATTAATTAAAACAACGTAGTAGCTTTCAAAATCAATTATATTGCACTAGTTTGAAATGTTAATCAAAAACTCAAATTCTGTTCCAGCAGCATTAGATAAAGCAATAACAATTCAATGCAAATTATAATAACATAAATTAATTTGGAAGAGAAAATAACCAGAGAAAGAGAGAGATGAGAAACCTGATTACAGCGATCGCATGTGAAGGGCAAGAAATCGATGAGCCTGCAATCAGAAACAGAACAATGCTTGCCTAGATCTGGGAATTGGAGAGTCCCCATCCAAACGAAGCTGATGCTGAAGCTGATGTGGAAGAGAGAAAACGATCGAAATCCTTTCAGAAAGTAAATGGAAAGGATTTCGAAAATGTGGAGAATTGTGAAATACGCGGATATAGGGTGGAAAGAAGAGGATGCTCCACCCAACAAACCAGAAATCCAGGAATCAGAGGGAATCCTTTTCCTTTCCTCCCTAACTCGTCGCTTTGATAACAAAATTACTAACAATAATTTCAGTTATCTATTTAATTAATTAATTATTTGGAATTATTATATTGGTTCGCCATCTGGAAATGGATTCCGTAAACGTGAAGGTGAAGTGGATGGGAACTATCAAACAAACTGTCAAAGGCTTTCTCAACATGCCCAATACAAAAATTATTGATAAAATTGCTTTGAGAATCTTTTAAATTGTGATTTTATTTTTAATTTTTTTTCTCATATTATTCTATAATTTTTAAATTGATCACAATGTTACTCCTTTTTGGGTTTAATTGCCATATACCATCCTTGTAAAATATTTTACACCATCGATCAATAATTTTTTAGGTATGAGTGACTTTTAAGATAATTAAGATAAAGTTAAACTTTTTTTATGATGCGTTGATTTGTGATTATTGACGTTGTAAAAAAGACTTTTGGGGTTACATTCAACTTTTTTTTGTATCCGTTAAAATAAGTTGTGTGACATGCTATCATGCCTAAGGGCCCATTTTTTGATGGTCAAGATAAGATAGAGACAGAATAGGATATAAAGCCGAATAAATATAGATATGATAAAGACATGATTACACTGTGTTTGATTACAAAATCCTATAAGAAATAAGATAATATATATTATTCCTTTTTTAGGTATAAAAATAACATATTATTTTATTATATATTTTAGATAAACTAATAAATAATGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATATGTTAATGACAAAACTACCTTTGTGACAACTATATTTCAATTATTAAAAAATTAAATTAATTTTCTATTTTTATATTTTTTAATAATAATTTTCTGTTCAATCATCATCTTCTTCGTTAAATCATCATCTTCTTCGTTTCAAGATTTGGAAATGAATTTAAAACGAGATCTGGAAACGAATCTGTAAAACAAATCTTGAAACGAGGATGAATCTTGAAACGAGATCTTGAAGAACGCAGAAACGAGATCTTGAAGAACCCATAAGCGATTGAAACGAGATCGTGGCGTCCGTTAGAAAGGGGATTTGTTCATCTTCGTTAGAAACGTAATCTGGGTTTGTTGATTCGTTCATCTTCGTTAGAAACGGAATCTGGGTTTGTTGATGATGTTGGAATTTGTTGAAATCTGGGTTCGTTGATGATGTTGGAATCTGTTCAATCGTTCAATTTGTTGATGATGTTGGAATTCTGGGTTTCAATTTTTATTGTTGCTGGAAATTGATTTTGAAGGTTATGTATTTGCTGGAAATTGTTTATTAATTTGGGGCAATTCTCGTTGATTTAATCCTGTTCGTTTCAATTCAGCTTTGCTTTAATTCTGTTTGTTTTTTGTTATAATTGTTTTTAGTTTTTTGGTTTTTATGTTATGTTTTAATTTAAAAATCTAAAATGGTGACGTGTAATTAGATTTTTTGCCACCTCAAAATGTTTGCCACGTAATTTAATGAATTTGAGACGCCACGTCAGCAGTTAACTGCCAGTTTGGCGTCCGTTAACAAAAACTAACGTCAGGGACCAACGTGAAACAAAAATGAAAGATAAAGGAACAAAACGAACCAAAAAAAAGATAAAGGACCAAAGCGAAAGCAAGAGCAAAGATAAATGACCAAAACAGATATTTAGTCTATAATCAATCATTTAATTAAACATGGGTAAACCTAACACATCCACTCAAATATCCTACACAATCTTATTGTTTTGGAACAATATTCCATTTCCATCCATAAAGTTAAGTTTTTTGCTTAAATTGCATAAACAGATGACATCACCAAAGTCATATTTCTTTTTGGAAAAAATTCTCTATGATGACAGAAATTTATTTCAAATTTGGTGTGCATGAATGGAAGAAAGTGGCGAATGAGCAGTGAAAGTCATTCCCCTTTAGTTATTTTTATTAAAACCGCGTGTCCTTATTTGACTGCAATTAGACTCAGCACCGAAAGTGTCGTTTGCTTTATTATAGTCAAGTTCAACTAACTATTAGTATTATATTATTGGTGTCAAAAAAAAGTTATCGGTATTGGGTACTAATATCACTTCCTTCCCTCCTTTGAGCTTCAAGTAGTAAATTTACTTTCAAATCATTCATTAAACTGCTAATTAAGCATAAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	554	821	5.80E-45
PF07714.20	PK_Tyr_Ser-Thr	552	824	6.90E-44

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.9.1:RLK-Pelle_LRK10L-2
Carbohydrate-Active enzymes Family	GH152

Gene Ontology

GO term	Description	Category
GO:0004672	protein kinase activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0008889	glycerophosphodiester phosphodiesterase activity	Molecular Function
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR003591	Leucine-rich repeat, typical subtype
IPR032675	Leucine-rich repeat domain superfamily

trEMBL

trEMBL term	Description
G7KUC1	_

SwissProt

SwissProt term	Description
TMK1_ARATH	Receptor protein kinase TMK1

KEGG

KO	Description	Enzyme
K00924	receptor protein kinase TMK	[EC: 2.7.11.1]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G66150	transmembrane kinase 1
Medicago sativa L.	MsG0780039960.01.T01	_
Oryza sativa L.	LOC_Os01g49614.1	Protein kinase domain containing protein, expressed
Cucumis sativus L.	Csa004312	_
Glycyrrhiza uralensis Fisch.	Glyur000185s00016443.1	_
Codonopsis lanceolata	Cl_chr08_36030T	_
Arachis hypogaea L.	AH12G04240.1	Receptor protein kinase TMK1 like

Expression pattern