| Gene ID | Annotation |
|---|---|
| Am09G012110.1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am09G012110.1 | mRNA | Chr09 | 48031301 | 48036755 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 227 | 269 | 8.80E-143 |
| PF13041.9 | PPR_2 | 290 | 339 | 8.80E-143 |
| PF13041.9 | PPR_2 | 328 | 374 | 8.80E-143 |
| PF13041.9 | PPR_2 | 360 | 407 | 8.80E-143 |
| PF13041.9 | PPR_2 | 466 | 514 | 8.80E-143 |
| PF13041.9 | PPR_2 | 503 | 549 | 8.80E-143 |
| PF13041.9 | PPR_2 | 536 | 584 | 8.80E-143 |
| PF13041.9 | PPR_2 | 570 | 619 | 8.80E-143 |
| PF13041.9 | PPR_2 | 605 | 654 | 8.80E-143 |
| PF13041.9 | PPR_2 | 640 | 689 | 8.80E-143 |
| PF13041.9 | PPR_2 | 710 | 759 | 8.80E-143 |
| PF12854.10 | PPR_1 | 287 | 313 | 1.20E-122 |
| PF12854.10 | PPR_1 | 322 | 352 | 1.20E-122 |
| PF12854.10 | PPR_1 | 356 | 389 | 1.20E-122 |
| PF12854.10 | PPR_1 | 497 | 528 | 1.20E-122 |
| PF12854.10 | PPR_1 | 566 | 599 | 1.20E-122 |
| PF12854.10 | PPR_1 | 602 | 634 | 1.20E-122 |
| PF12854.10 | PPR_1 | 636 | 668 | 1.20E-122 |
| PF12854.10 | PPR_1 | 672 | 703 | 1.20E-122 |
| PF01535.23 | PPR | 293 | 323 | 1.10E-104 |
| PF01535.23 | PPR | 328 | 358 | 1.10E-104 |
| PF01535.23 | PPR | 364 | 393 | 1.10E-104 |
| PF01535.23 | PPR | 503 | 533 | 1.10E-104 |
| PF01535.23 | PPR | 573 | 602 | 1.10E-104 |
| PF01535.23 | PPR | 609 | 638 | 1.10E-104 |
| PF01535.23 | PPR | 643 | 673 | 1.10E-104 |
| PF13812.9 | PPR_3 | 282 | 337 | 4.40E-74 |
| PF13812.9 | PPR_3 | 348 | 404 | 4.40E-74 |
| PF13812.9 | PPR_3 | 460 | 509 | 4.40E-74 |
| PF13812.9 | PPR_3 | 524 | 580 | 4.40E-74 |
| PF13812.9 | PPR_3 | 561 | 616 | 4.40E-74 |
| PF13812.9 | PPR_3 | 594 | 650 | 4.40E-74 |
| PF13812.9 | PPR_3 | 629 | 687 | 4.40E-74 |
| PF13812.9 | PPR_3 | 699 | 757 | 4.40E-74 |
| PF17177.7 | PPR_long | 450 | 594 | 2.50E-30 |
| PF17177.7 | PPR_long | 586 | 675 | 2.50E-30 |
| PF10037.12 | MRP-S27 | 610 | 663 | 1.90E-16 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0008184 | glycogen phosphorylase activity | Molecular Function |
| GO:0004519 | endonuclease activity | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| GO:0006396 | RNA processing | Biological Process |
| GO:0005975 | carbohydrate metabolic process | Biological Process |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| trEMBL term | Description |
|---|---|
| A0A1S3E0L6 | _ |
| SwissProt term | Description |
|---|---|
| PP360_ARATH | Pentatricopeptide repeat-containing protein At5g01110 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G01110 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Medicago sativa L. | MsG0780040490.01.T01 | _ |
| Oryza sativa L. | LOC_Os10g35240.1 | Rf1, mitochondrial precursor, putative, expressed |
| Cucumis sativus L. | Csa019312 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000019s00002160.1 | _ |
| Codonopsis lanceolata | Cl_chr07_00900T | _ |
| Arachis hypogaea L. | AH12G26170.1 | Pentatricopeptide repeat-containing protein At5g01110 like |