Gene detail

Detail information of Am09G010930.1 Annotation

Gene ID	Annotation
Am09G010930.1	ubiquitin-specific protease 5

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am09G010930.1	mRNA	Chr09	43494994	43506502	-

Sequences

CDS:

>Am09G010930.1
ATGGGAGAAGTGTCGATGTGTAGCAGTAGCAGTTGTGAGCTAAGCCCTGACGAGGAAAGAATCATGATCAGAGACATTGCTCTTACTGCCCAAGCTAATAGCAAAGAAGGCGACACCTTCTTTCTGATCACTCAGAGATGGTGGCAACATTGGATTGAATATGTAAACCAAGACCAGACAAACACTTCTTATGATGGATCTTCCTTTTCAGAACATTACGATTTGGCCAATTCAAGTGCTTTAAAGAGACCACCCGGTATTGATAATTCTGATTTGATAGATAATGCTGCATCAGAGGACTCTGGTGGTACGGGTATTGAGATTCATGATACACTTTTAGAAGGCCGTGACTATGTATTACTTCCTCAAGAAGTTTGGAACCAATTATTTACATGGTATGGTGGTGGACCTACATTGGCAAGAAAACTTATTAGTTCGGGTCTTTCCCAGACAGAATTGACAGTAGAGGTGTATCCTTTACGGCTTCAATTACTTGTGTTACCTAAAAATGATCGATCAACGATTAGAATAAGTAAGAAGGAAACCATTGGACAGCTTCACAGAAAAGCTTGCGAAATATTTGATCTTCAGTTGGATCAAATTTGTGCAGGAAACAATGATGTTTCAAAGTTTCCTACACAAAACCATGGACACAGAAAACAAAGTGAAAATAAGGTGCGCATTTGGGATTACTATGCCAGCCAAAAGCATACCCTGATGAATGACATGGACAAAACTCTAGATGATGCCAATTTGCAAATGGACCAAGATATTCTTGTTGAGGTCATAAACAACACAAATAGCACAAGTTCTGCTCATGAAAATGGGTCCGCACAGAAGGAAGTGAATTCTTTTCTTGTGGAGCCTTCAAAATCGAGCTTAGCGGCTGGCAAGGGCACATCTAGAGGCAACAATGTTGAACCTTCATCTCAAAGCCTAAATTCTCCAGTCAGAGATGTGGAAAATCCTTATGGAACTAGTGGTGTCACCACAAGAGGTTCATTTGGTGGTCTCACTGGGTTGCTGAATCTTGGCAATACTTGTTTCATGAATAGTGCAATACAGTGCCTTGTTCATACACCAGAATTCGCTAAGTACTTTAGGGAGGACTATCACCGGGAGATAAATTGGCAAAATCCGTTGGGCATGGTTGGTGAACTAGCCCTAGCATTTGGTGAGTTGCTTCGAAAACTATGGGCACCTGGGCGGCAACCAATTGCTCCTCGGCCTTTTAAAACAAAGCTTGCTCGCTTTGCACCTCAGTTCAGTGGACACAATCAACATGATTCTCAGGAGCTTTTAGCATTTCTTTTGGATGGTCTCCACGAAGACTTAAATCGTGTAAAGCACAAACCATATATTAAGTCTCGAGATGCTGATGGCCGACCTGATGAAGAAGTGGCTGATGAGTATTGGGCAAATCATATTGCTCGTAATGATTCCATAATTGTTGATGTGTGCCAGGGGCAATACAAGTCAACTTTGGTTTGTCCGGTTTGCAATAAAGTCTCTGTTACATTTGATCCTTTTATGTACCTTTCCCTGCCTCTCCAGTCCTCCACCAATAGGACCATGACAGTAACAGTTTTCAGTTGCGATGGAACTACCCTACCATCTCCGTGTACAGTAACTGTTCCCAAGCAGGGACGATGCAAAGATCTTATACAGGCACTTAGCAATGCTTGCTCAGTGAAGCATAACGAGAGGCTAGTGCTTGTGGAGATACGAAACCATTTAATTTATAGATATTTTGAAGATCCTGTTCTATTGTTGTCCTCGATTAAAGATGATGATCGTCTTGCTGCTTACAAGATTCCAAAGATTGACAAGAACACGAAATACATTCAGTTGATACATCGCCGTAGAGAGCAGAGTAGCAACTCACAGACCATATCTGGATGGAAACCATATGGAACACCCATTGTTTCATTGATCTCATGTGATGAGAAAGTCAAAAGAGGTGACATACAAGTAATAGTTAATCGGATGCTCTCTCCTCTGCTAAAGAAAACTGACAATGTACAAAGCAGTGACACTTGTGCTGCCAACACGGTGTCAACTTCAATAAATAAGGATGCTACTGTTTCAAAGACACCACAACTACCAACATTACCTCTCCTATTGGTAGATGATAACAATGCTTGCATTGATCTTTCAATGGGAGAAGAGAAAGTAGTTAAATTTTCACCATCATCAGCAACGGTTTTAGTGTATATGGATTGGTCTCAGAAGCTTCTGGAGAAGTATGATACTCATGTACTTGAGATGTTGCCAGAAGTTTTGAAATATGGGCCTATAACCAAGAAGGCTCGTACTGAACCTCTCTCATTGTACACCTGCTTGGAAGCTTTTCTGCGTGAAGAACCTTTGGTGCCTGAAGATATGTGGTACTGTCCTAAATGCAAAGAGAGACGACAAGCCAGCAAAAAGCTCGATTTGTGGAGGCTCCCAGAGGTTTTGGTCATTCATTTAAAGAGGTTCTCATACAGCAGGTCAATGAAGCATAAGCTAGAGACTTTTGTTAACTTTCCAATTCATGATTTTGATTTAACAAATTACATAGCCAACAAAAACAACTCGCGGCGTCAACTATATGAATTGTACGCCCTTACAAATCACTATGGTAGTATGGGCAGTGGACATTACACTGCACATATTAAGCTTTTAGATGAAAACAAGTGGTACAATTTTGATGACAGCCACATATCATCCATTAGTGAAGACGAGGTTAATACTGCGGCCGCCTATGTTCTATTTTACCGGAGAGTTAAGACTGATGATGCCGTTGAAAGCAATGGGGCTTAG

Protein:

Promoter(3k):

>AM09G010930.1
CTCCTTCATTCCAAGTTGCACCAGCCAACATGTCAATCTTCAGTGTTCTAACAATGATGACAGGAGTTATTCTATACGAACGACTCTTCGTACCTTTCGCGCGTAGATTCACGAAAAACCCCGCCGGAATAACATGTTTGCAAAGAATGGGAGTAGGCTTAGTGATCAACATTTTAGCCACTATAGTTTCAGCATTAGTGGAAACAAAAAGGAAAAATGTTGCTGCAGAGTATAATTTATTGGATGATCCAAAAGCTACTATTCCTATTAGTGTTTTTTGGTTGGTACCACAATATTGTCTTCATGGGGTAGCTGATGTTTTTATGTCTGTTGGACACTTAGAATTTCTCTTTGATCAATCACCTGAAAGTATGAGAAGTAGTGCTACTGCTTTGTATTGCATAACTGCTGCTGTTGGGAGCTATTTGGGTACATTGCTTGTGACATTAGTACATAACTACACTGGAAAAGAGGAGAATTGGTTGCCTGATAGGAACCTCAATAGGGGTAAATTGGACTACTATTATTATCTTGTTAGTGGGATTCAAGTTATAAATCTCATTTACTATGTTATATGTGCTCGGTTTTATACTTACAAGTCCTTGGAAGAACTTTGTGATAGGAACAAGAAAGAAGATTTGGAACTAGCCAGTGAAAATACCTCCTCTTCTGTCAAGCAATGAATTTACAAGGGATGAATGAAATTACATTGTTGTTGATATTAGTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGCATTGTTGAACTCTGGTGAATGTTCAACTCCTCTATAAGTGGAATATTTAGAAATATAGAGTGTGGATTTTCTTTTCTTTTCATAATATGTACTTGTATGATCACTTGACATTAGTCATTAAAGAGTCAATTTATCAACATATTAAAGAATTGTTGCCAAATTTGAATTTATTTTAAATTATATCTAGATCTCAAGTAGGGGTGTCAAAACAAATTTGAGTTGAGATCCACCAAAAAAAAACAAATTTGAGTTCCTCTCTATTTTTCAAAGAAATGAAGGTTTTGGTGTGTATAAATACACATATTTTTAATTCGAGTGACATTTATTAGATATTTATGCGTATGTATGCATACTTTTATTTATCAAAAGTGTATTTATGCATAATTTTTTTTTATAAACCGGGTATTCTCTGCGCGCAACTGCATAGACTAATCCCTCGAGTCGGGTAGGACAACAATGGGGAACAAAGCTCTCCCTCACGAGATTTAACACTGCTGCATGCTCAAAGATGGATTCGAATTCTAGACATTGGTTAAGAAGTATTTATGCATAATAAATCAAAGTAAGTGAACATTTTATTTATTTTGAGAAATAAAGAGGATCTGAACACGTCAAATCAATTGATTTATGGTTTATTTATCCACTCCATCCATTACTAGAAAAAAAAGTTAATGGATCCAAAATAAGATGAACTAAGAGAATGACAACATTGAAGAATTAGGAGAATTTACTAAAGAGCTACGAAAATGTTGTAAAAAGATATATGTAAAGGAGAAAAAACGAAAGAGAAGTTACCTCGAAAGAATCTATATGCAGGAGAAAGCAAAAGAAAAGGGAGGGGGAAATTGTGTGTGAAGGGAGAAAGAAAGGGAGAAAGAAAAGTCGATGAAGGGAGGAATGAATGAGTAAAGGGATACAATGCTGGTTAAATTGAACTTTCCATACCAATTATAGAGCGGTGTAGTTTCTATTGTTAGTCATTTATCATTTTCAAACGATAATTTCATATCTTTTAGGGCGAGAGAAGAAGATGCCACATCCATGAAAAATATCTTTGTCACTTGTGCAAAAGCTTCATGCCATGCTATTAATTTGCAAAAGCCTTAGATTTTCTTTTTATAGGAATTTAAAGGAGCTTTTATGGACTTCTATTACAAATATTTTTGAGGTTAAAAATTTTCTAGGAATGAGCAAGTATCCGAGACTCCGTCTATGAGGTTAAAAATGTCCAATAGAAAATAATGATATAGCTAAGCTATATAAGACAAATCTTTGACAATCAACATTTCATAAACAAATAAGCTAATAAAAAAACAACAAAGATATTTTTGTAAGTTATTGACAAAAGCTTTTTTTGGAGGGACTAATTTAATATGACCCCTTACTAGACTGCAATTAGTGATCTGAATAGAAATTGCTTCTCGAAATGGTTATCAGAACCTTATTTGTGAAACTGACTCCAGAATGCACTGGGTTTCATCAATAATGGTGTCCCTTCCGTCCATCCTTATATGCTCCTATTGTTGACTATATTCGCTCATTCTCAGCACGTGATTGACAGTTACCTTTCACCCACTCCCTTTGCGAGGGAAACTCGTGTTCAGATTGGCGAGCTAAAAATGGTACATCTATGGACTACAGTGTTCATCATTCGCGGCTTTTCCCTCTGGCTATATCTACTTCTCTTCAAGCTGATGCTATAGGAATTGTTAGATTAAATCCTTAGTCGGTTTTTGTGTTGCTTTTCCTTTCTTGTTAATAATAAAAAAAGACTGCAATATTTACTAGCAAGAGAGTTGATTTGAGTGGTAGTTGGCTCAGATCCCACCCCAATACAGGGACCGGCAAAACCGGTACACACGTAGCCAAATTTCCAAGCATAAATTAGTCACCAACAAAACCGATAGATCATACGCACCAATAACACGGTAATTAAAAAAGACCCCAATGTTTTATCCCAATTTTTTTTAATGTGGACAAATAGTTAACCTACGCTCCGGTAAAGGAAAATAAATTTGCGACTACCCCCCCTGGGCACTGTGACTGCGAAGGTAGAAGAGAAAGAGAATTGCAGTTCTAGATTCCGGAGTTTCTCGTTCTTTTTTATCCCTTCCCTCTGAAACTCGATTTATTCAAATTGAAGAAAAATTGTGAGAGAATTCGAAATACAGAAATTGGGTTTCGGTGAGAGAGGCGAAGAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00443.32	UCH	339	920	6.50E-91
PF06337.15	DUSP	37	144	2.30E-22
PF13423.9	UCH_1	762	902	2.00E-12
PF14533.9	USP7_C2	512	652	2.40E-08

Gene family

Gene family	Subfamily
Ubiquitin Family	USP

Gene Ontology

GO term	Description	Category
GO:0004843	cysteine-type deubiquitinase activity	Molecular Function
GO:0016579	protein deubiquitination	Biological Process
GO:0005737	cytoplasm	Cellular Component
GO:0006508	proteolysis	Biological Process

InterPro

InterPro term	Description
IPR018200	Ubiquitin specific protease, conserved site
IPR028889	Ubiquitin specific protease domain
IPR006615	Peptidase C19, ubiquitin-specific peptidase, DUSP domain
IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR038765	Papain-like cysteine peptidase superfamily
IPR035927	DUSP-like superfamily

trEMBL

trEMBL term	Description
A0A8B8L0M2	_

SwissProt

SwissProt term	Description
UBP5_ARATH	Ubiquitin carboxyl-terminal hydrolase 5

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G40930	ubiquitin-specific protease 5
Medicago sativa L.	MsG0780040349.01.T01	_
Oryza sativa L.	LOC_Os10g07270.1	ubiquitin carboxyl-terminal hydrolase 5, putative, expressed
Cucumis sativus L.	Csa015417	_
Glycyrrhiza uralensis Fisch.	Glyur000013s00003267.1	_
Codonopsis lanceolata	Cl_chr06_32010T	_
Arachis hypogaea L.	AH16G23920.3	Ubiquitin carboxyl-terminal hydrolase 5 like

Expression pattern