Gene detail

Detail information of Am09G010270.1 Annotation

Gene ID	Annotation
Am09G010270.1	ubiquitin-conjugating enzyme 22

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am09G010270.1	mRNA	Chr09	41219152	41222683	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM09G010270.1
TAGTTGACAAGAATCACAAAATTGCTTTGTATAGATGGACCAAAGTTTTCATAGAAACAAAATTGAAGTAAACAGGCTATCAAGCTTACACTGTAATTTCACAAGATAGATGCCGTAAAAGTATAACAATGATAGAGCTATCGGCCCAAGAAAGAAACCACGAGAATCTCAGAGTCTCTATTATATGAAACACAGAATGAATGAATGAATGGAAGTAAATGAAAACGAAATAGGTTTTCAGCGAAACTAAAAATCCTAAATCAGCAATTTAAAATTGAACACAGATCCAACAAGTAATTAGGGTTTACCAATCTGGCAGTCACCAGCAGAGAGAATAGAGACAGTGGCTTACCGTCGAGAAGAATAATGGAGACGGCGAGAGGCCAGAGAGGTTGAACACAGAACAGACAGTCTTAATTCTTAACAATGAAGTCACAGTGGTTGCAGAGTTCGTTTCTCTCACGGTGCAAAGGGAACTTTGGGTTTTTTGAAATTGGTAAAGTGTTATCATTAATGATCCATTGAATTGGGGAAATTACTCTGCTACCCTTTTAGTATTTGTTATTAAGCTTTTGGCTTAGTATCCTAAATCAGTCTCTAAAAAACGCACATTCTAGCCGTGTCTATGAAAGAATTTCTCTTGTCGTCCGTTAAAAATAGCATACCAAAATATGCTTGTTTTTCTTAAGTTTTTTTTGTTCATAATTCAAACTAAAAGTTATTATATTTTAGATTATTATATTAGTTGTATATTCTCGAATTAGACTTATAAAATTTTGGGCGTGACTAAAAATCTATTGGAAGTGGAGAACCACACGAACCTTACAATGTTCCTATAGTTATTTTAAAAGGATTATACCTCAATTTTTTTAAAAGGATTAGATTTGAGACTAAATAAGTGTGTCTTTTTTTTTTTTGAGATTTAAGTGTGTCTTTTTGTTAAATACTAGTTTGAATTGTTATTCTTTTTTATCGTGAGATAATTTATTTTATAAATGACGACAATATCTTTTCTAAAAAAATATTAGATTATTTTGGATCTCAATGATAAAAATATAGATTTTTTTTGATAAAAAAGTATAGATATTATTTTAAAAGTATTAGGCTATTTTGTGCCATCCAAATAACCATGATATTATATATTTTAGTAATACGATTTAACTTTTTGCCCCCTCAAGATTTTCATCTTAGCTCGTGCACAATTTGTACATCAACCCTTAATAAAATTGATAAACAAATTTAATTATGAATTTCATTTATATACATAATAAGAATATAAGTGTTTTACATTATCTAACAATTACAAGTTGACATATTATTAAAAAAATGTTAGTCAATTAAAAATCATCTTATATATTAACAATTCCATAAATTGTTATTGATTGGTGCGTATTTTATAGATTTACATCAGCTTACATAATTTTAGGTAATCTGACACATCCATTTCTTATTAATAAAAATATAGTTTAATTAATATATATTATCGCTATAAATTTTTTACCCCATCATCTAAGAAAAAGTCAAGTATAAGCGACTTTAAAGGAAGTTAAGATAAAATCAATTTTTTTAACATATCATTTTGTAATTGATTAATGTAAAAAATCTTGTGGGCATATAAATTAAAGAATCCTTTTTTATTCTTTATTGTACGAAAAATTTAAATTAAAAAATACACCCATTTTCAAATCACTATACCGTTAGTTAATCAATCGTACCCATGTGCATGTGTACTCAGTCTCGGGAAGAGCGCGTGAAACCTTTCAATTGTAGGTAGACACGACGAATCCAACGTCTATAAATCCTGAAGATCTCGGCTACCTGCACGTCATTTCAAAATCATAGACCTAATTTTCTGATTAATCAATTAATTAATCTATCCAAACCCATAAATTAATAACTTTACATCTTTTAATTAGATAATTAATCAACGGCGTCTCTGTTTGCATTCACATGAATAAATATTAATTTCTTGGCACCAAAAAATAATTTATTAAGTTCTCTTGTCCTCAAATTTCCACCAATCAATCATTCATTCATTTCAAGGAGGGATCTCTCTCTCTCTGGTTTTCTCACTCCCTCTTCTCTTTCTCTCTCTTCTTGCACCTGGTGTGAAGGTGAAGGTGAGTCCCCATCTGTGTTTTGCAGTTCGTCCATTTCAATTTGATTTTATACTTTTGTGGCTTTTGCATAGCGTGTGGAACTGTGTTTTCTTTAATTTGATTTGATTTTCGAGCATAGTCGCTCTTTTTGTTTTCTTCAATTTCGAAATCGGTGTCCAATTCGAGGTCTTGAATACCCTAGATTTGATTTGTGTCATGCCCGCGAATGATGATTTTCCAATTCAATAAGTGATTTCATTTTGGGGTGTGATTTCTTTCGTGTTGGATTAGGTATATTGAGATTCTGAGGTTTTCATTTTTCCAATTAGGGTTTTGCTTCCGTGATCGACTCTTGTTTTCAAAAAGAGGGGTTTCAATTTTCTTTCAGTCTCTTTTGAAAAATGATAGTTTTTTATTTTATGTTGTGCGTGCGAAGCGTTTTGTTGTAAATGAGATAAATTCAGGTTTAGAAGTTCTACTTGAGTTGCCTTTTCCTCTGTATCATCGTTTGGTTTGGTAATTTGTTTTATAGGGTTAGGGTTCTACTTCTAAAGTAGATTTGGGTATGAAAAATTTATAATTTTTTGCTGGTTTGTCTAATTGAGAATGTTGATTTATCTTTCACTAACAGTGAATGAATATTATACACCCTGCACTCCTTGGACTTCAGATTCTAAAATAGTTTCATTTCTTGTTTGAATCGCATGTTTGATAAGTATCTGGCCTTAAATATTCATACAATAATTTCACTTATTCGTGATAAAAATACCTTTGCAGGCATTTCTACTTAATTTCTTTCTCTGATCTGAGCATCAAGTTTGGGTATTCAGTTAAGTGTTTGCGAAGGGTTCCTCCTCAGGGACAGAACTAAACAGAGAGTGCCGGTGCCCTTGTTTCGCCG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00179.29	UQ_con	15	150	5.10E-38

Gene family

Gene family	Subfamily
Ubiquitin Family	UBC

Gene Ontology

GO term	Description	Category
GO:0016740	transferase activity	Molecular Function
GO:0043632	modification-dependent macromolecule catabolic process	Biological Process
GO:0140096	catalytic activity, acting on a protein	Molecular Function
GO:0016877	ligase activity, forming carbon-sulfur bonds	Molecular Function
GO:0140657	ATP-dependent activity	Molecular Function

InterPro

InterPro term	Description
IPR016135	Ubiquitin-conjugating enzyme/RWD-like
IPR023313	Ubiquitin-conjugating enzyme, active site
IPR000608	Ubiquitin-conjugating enzyme E2

trEMBL

trEMBL term	Description
A0A8B8L8Y8	_

SwissProt

SwissProt term	Description
UBC22_ARATH	Ubiquitin-conjugating enzyme E2 22

KEGG

KO	Description	Enzyme
K10583	ubiquitin-conjugating enzyme E2 S	[EC: 2.3.2.23]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G05080	ubiquitin-conjugating enzyme 22
Medicago sativa L.	MsG0780040295.01.T02	_
Oryza sativa L.	LOC_Os06g45000.2	ubiquitin-conjugating enzyme, putative, expressed
Cucumis sativus L.	Csa011149	_
Glycyrrhiza uralensis Fisch.	Glyur000256s00016239.1	_
Codonopsis lanceolata	Cl_chr01_13640T	_
Arachis hypogaea L.	AH16G24810.1	Ubiquitin-conjugating enzyme E2 22 like

Expression pattern