| Gene ID | Annotation |
|---|---|
| Am09G009110.1 | transcription regulator NOT2/NOT3/NOT5 family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am09G009110.1 | mRNA | Chr09 | 37708746 | 37726469 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF04065.18 | Not3 | 4 | 236 | 2.90E-82 |
| PF04153.21 | NOT2_3_5 | 761 | 899 | 8.30E-40 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0000289 | nuclear-transcribed mRNA poly(A) tail shortening | Biological Process |
| GO:0000932 | P-body | Cellular Component |
| GO:0005634 | nucleus | Cellular Component |
| GO:0006355 | regulation of DNA-templated transcription | Biological Process |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR007282 | NOT2/NOT3/NOT5, C-terminal |
| IPR040168 | Not2/Not3/Not5 |
| IPR012270 | CCR4-NOT complex, subunit 3/ 5 |
| IPR038635 | CCR4-NOT complex subunit 2/3/5, C-terminal domain superfamily |
| IPR007207 | CCR4-Not complex component, Not N-terminal domain |
| trEMBL term | Description |
|---|---|
| A0A9D4XXA8 | _ |
| SwissProt term | Description |
|---|---|
| CNOT3_HUMAN | CCR4-NOT transcription complex subunit 3 |
| KO | Description | Enzyme |
|---|---|---|
| K12580 | CCR4-NOT transcription complex subunit 3 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G18230 | transcription regulator NOT2/NOT3/NOT5 family protein |
| Medicago sativa L. | MsG0780040152.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g44900.1 | CCR4-NOT transcription factor, putative, expressed |
| Cucumis sativus L. | Csa009068 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur001472s00033061.2 | _ |
| Codonopsis lanceolata | Cl_chr04_50480T | _ |
| Arachis hypogaea L. | AH11G24050.2 | CCR4-NOT transcription complex subunit 3 like |