| Gene ID | Annotation |
|---|---|
| Am09G008410.1 | Pentatricopeptide repeat (PPR) superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am09G008410.1 | mRNA | Chr09 | 34771809 | 34774525 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 122 | 170 | 1.40E-60 |
| PF13041.9 | PPR_2 | 196 | 243 | 1.40E-60 |
| PF13041.9 | PPR_2 | 301 | 348 | 1.40E-60 |
| PF13041.9 | PPR_2 | 409 | 454 | 1.40E-60 |
| PF13041.9 | PPR_2 | 472 | 511 | 1.40E-60 |
| PF13812.9 | PPR_3 | 297 | 346 | 1.30E-45 |
| PF12854.10 | PPR_1 | 298 | 330 | 4.40E-30 |
| PF17177.7 | PPR_long | 152 | 369 | 1.40E-22 |
| PF17177.7 | PPR_long | 374 | 508 | 1.40E-22 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0031930 | mitochondria-nucleus signaling pathway | Biological Process |
| GO:0009507 | chloroplast | Cellular Component |
| GO:0140053 | mitochondrial gene expression | Biological Process |
| GO:0016787 | hydrolase activity | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| trEMBL term | Description |
|---|---|
| A0A3Q7X5D1 | _ |
| SwissProt term | Description |
|---|---|
| PP262_ARATH | Pentatricopeptide repeat-containing protein At3g29290 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G29290 | Pentatricopeptide repeat (PPR) superfamily protein |
| Medicago sativa L. | MsG0780036716.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g11310.1 | PPR repeat domain containing protein, putative, expressed |
| Cucumis sativus L. | Csa009719 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000809s00030655.1 | _ |
| Codonopsis lanceolata | Cl_chr03_38960T | _ |
| Arachis hypogaea L. | AH14G43160.1 | Pentatricopeptide repeat-containing protein At3g29290 like |