Detail information of Am09G008330.1 Annotation
Gene IDAnnotation
Am09G008330.1 genomes uncoupled 1
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am09G008330.1mRNAChr093420336534206824+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF13041.9PPR_22633088.00E-88
PF13041.9PPR_22973468.00E-88
PF13041.9PPR_23373828.00E-88
PF13041.9PPR_23684178.00E-88
PF13041.9PPR_24034388.00E-88
PF13041.9PPR_24745208.00E-88
PF13041.9PPR_25125568.00E-88
PF13041.9PPR_25445908.00E-88
PF01535.23PPR4064354.50E-74
PF01535.23PPR5125414.50E-74
PF12854.10PPR_13643966.30E-73
PF12854.10PPR_14034326.30E-73
PF12854.10PPR_15405716.30E-73
PF13812.9PPR_32863451.80E-61
PF13812.9PPR_33564151.80E-61
PF13812.9PPR_34645211.80E-61
PF13812.9PPR_35325921.80E-61
PF17177.7PPR_long2814021.20E-22
PF17177.7PPR_long4115801.20E-22
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0003677DNA bindingMolecular Function
GO:0031930mitochondria-nucleus signaling pathwayBiological Process
GO:0016301kinase activityMolecular Function
GO:0016020membraneCellular Component
GO:0009699phenylpropanoid biosynthetic processBiological Process

InterPro
InterPro termDescription
IPR011990Tetratricopeptide-like helical domain superfamily
IPR036063Smr domain superfamily
IPR002625Smr domain
IPR002885Pentatricopeptide repeat

trEMBL
trEMBL termDescription
A0A2K3N083 _

SwissProt
SwissProt termDescription
PP178_ARATHPentatricopeptide repeat-containing protein GUN1, chloroplastic

KEGG
KODescriptionEnzyme
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Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT2G31400 genomes uncoupled 1
Medicago sativa L.MsG0780039012.01.T01 _
Oryza sativa L.LOC_Os12g37550.1PPR repeat domain containing protein, putative, expressed
Cucumis sativus L.Csa001860 _
Glycyrrhiza uralensis Fisch.Glyur000809s00030654.1 _
Codonopsis lanceolataCl_chr06_37890T _
Arachis hypogaea L.AH11G20510.1Pentatricopeptide repeat-containing protein At1g74850, chloroplastic like

Expression pattern