Gene detail

Detail information of Am09G007230.1 Annotation

Gene ID	Annotation
Am09G007230.1	SNF1 kinase homolog 10

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am09G007230.1	mRNA	Chr09	31095485	31101726	-

Sequences

CDS:

>Am09G007230.1
ATGGATGGACCAGCTGGCCGAGGTGGTGGTACAGGCGTAGACTTGTTTCTACCAAATTATAAATTGGGAAAAACACTTGGCATTGGATCGTTTGGCAAGGTGAAAATTGCGGAACATGTATTGACAGGTCATAAGGTTGCCATCAAGATCCTTAACCGTCGCAAGATAAAGAACATGGACATGGAAGAAAAAGTGAGAAGAGAAATAAAAATTTTAAGATTGTTCATGCATCCTCACATTATACGACTCTATGAGGTCATAGAAACTCCTACTGACATATATGTTGTCATGGAGTATGTGAAATCTGGAGAGCTCTTTGATTACATTGTTGAAAAGGGTAGGTTGCAAGAAGATGAAGCTCGTAACTTTTTTCAGCAGATAATATCTGGTGTGGAGTACTGTCACAGGAATATGGTGGTTCACAGGGATCTGAAACCTGAGAATTTGCTTTTGGACTCCAAATGGAATGTCAAGATCGCTGATTTTGGCTTAAGCAACATTATGCGTGATGGACACTTTCTTAAAACCAGTTGTGGAAGCCCCAACTATGCAGCTCCTGAGGTTATCTCGGGGAAGTTGTATGCTGGACCTGAAGTAGACGTCTGGAGCTGTGGTGTAATTTTATATGCCCTTCTTTGTGGAACTCTTCCTTTTGATGACGAAAACATTCCAAATCTCTTCAAAAAAATTAAGGGAGGAATATACACTCTTCCTAGTCATCTGTCACCTGGTGCTAGAGATTTGATACCAAGGATGCTTGTGGTTGACCCCATGAAGAGGGTGACCATACCTGAGATCCGCCAACACGCATGGTTCCAAGCCCGTCTTCCGCGTTATTTAGCTGTGCCACCACCAGATACGATGCAACAGGCTAAAAAGATTGACGAGGAAGTCCTTCAGGAAGTTGTCAATATGGGATTTGACAGGAGTCAATTGATTGAATCTCTTAGCAACAGGATACAAAATGAGGGTACGGTGGCGTACTATTTATTATTGGACAACCGATTCCGTGTATCCAGTGGCTATCTTGGAGCTGAGTTTCAGGAGTCCATTGACTCAAGTTTTAACCAAATGCATCCCAGTGAAGTTGCTTCTTCAGCTGTCGGGCATCGCTTTCCAGGCTATATGGATTCTCCAGTAGCAGGATTGAGACCACAGTTCCCCGTTGAAAGAAAATGGGCTCTTGGGCTTCAGTCCCGAGCTCATCCTCGTGAAATAATGACCGAGGTCCTTAAAGCTCTGCAAGAATTAAATGTTTGTTGGAAGAAGATTGGCCACTACAACATGAAGTGCAGGTGGGTTGTTGGCATTCCTGGCCATCATGAAGGAATGGTGAACAATATTGTGCATAGTAATCATTACTTTGGAGATGATTCCAGCATTATTGAAAATGATGCTGTTTCTAGTTCAAATGTTGTCAAATTTGAAGTGCAGCTTTACAAAACTCGGGAAGAGAAGTATCTGCTTGATCTTCAAAGGGTGCAGGGTCCACAGTTTCTTTTCTTGGATCTCTGCGCCGCTTTCCTTGCACAGCTTCGTGTCCTCTAG

Protein:

Promoter(3k):

>AM09G007230.1
AGGACAAGTGAAGTTTAAGAGGGGAAGTATGAAGTGAGCTCACATGCATGTCTAGCCTAATTATGGAGCTTGGATGACGGTCACAAAGATAACGATTCAAAAGACCAAAAAGATATTCAAAACACTGGATAAATATTTGTCACTCATAAATATAAAACACACACAAGACAAATAATTGTCATTGATACATAAAAAAACACGTGACAAATTTTTGTTACTAACAATTTTTATTGATTGTGCAAATTATAAACGGAACAAAAATAAGCCAAAGAATCTGTTACTATTTTTCTTTTGAGTCTCAACGACAAACAACATCATTAAGGTTGACAAAATCATCACTCTAAGTTGATTCGTTCTCAATTATTCCGCTTTATGATCAATTTAATCTAGCATAAATAATTATGTTTCAAATGCTTACTAAGGTTTGTTGTCTTCTGTAGGAGAATACATTAATTAAGTATGACAACAATATGAAGAATGTTGATATTCAATAAAGCTGTGAATATTCTTCTTTTATGCAACTTCCGGTTAGAAGTAACCTATAAAGTATGGACAATGACATCTATTGCCTCTAAGAGTAATATTATGTGTAGCTTTTGTGGATTTATTTTTGGGTCTCTAATATTTATGTCATTTGTTTTTATCAATATGCAAAATATCAAACTATTTCGGCAATGTTGTTCCTAACAATGTTCAATGTATTTGTTACTAATTTACGGTCTTGACAATAAATTCATGCAAGGAATGATTGATTAACTAATTACATCTCAAAAATTACAAAATGACAACCATAATTCAATTGAACAAATTTATGGAGTTTCATTTCAAAAAATATCGCAATATTTTCTAACAAGAAAAAAAATCAAACTTATGTACTTTCCTATTGAAGTAACATACTAAATTAACACGAAATCTAATAATTTATCTTTTTTTTTGTATGGACTAACAGAATATCATCTGAGTTCATTCATTCAAAGAATCCGCTGCTACCCATGCACATACGTATGTATGTTACTCGTTAGACCGATAAAACAATTAACTATATTTTATAGATTGTATTTTTTTTATTTATATAAAGCATATTTTAAAAAGGTGTAAAAACCAAGTGACTCGTGCTTGCATTCACACGAGTATTTTACTCGTTACATAGGAAAAAAATGGATTGAAACATCAACTTAGGGAACATTTCATTCCTATATATATTCCTATATATATAGGTACTAAAATCAAACATTTTTATATGAAAATTTTCATAAACATAAATGAAACAATTATAGTAACTATTGTTGCCCTCTAGATTTACATGTCTTGGACTTTCGCGTCATTTCCTCACAGTTAAAAATTTGGTGAAAAATAAAAACTATTGTTGCGCTCAAGATTTACAAATTACAAACCTTATATAGGATCCACAGCTGTAGAAAAAGCTAAGGTAACTAACCATACTGTAAAAATTTTACTCATTCTATATCAAAACGCACCGTATTTTGGCATATTAGGAGAATGCAGACGCTGATGCAAGCAAGCCTCGAAAGAAAGTTTAATTCATCCATCGTCAGTTCTTCCCGATCCCAATCCACAACTTTTTAGGGTTCCTACGATTTCAGTTCCTTCTTATTCCCAAGCTCCATTCACTCCAACAAATCCCTGGTGAGCCTGTTACTCTTTATTCCTTCTCTCTCTCTTATTTATCTTTTTTGTTTGTTTGTTTGTTTGTTTGTTAATTTCGCTCTCTATTTTCGTTCCGAGATTCTTCTTCTTCTCAATTTTGGAAATAAAACGCGCGCGTTTTAAGATCGGAATCCCGCCAGCTTTCTGATTTACTTCGCGTTTGTGAAGATTTTCATTCAGTTGACTTAATTCAAATCATTATCTTCTTTATGTTGAATTATTAATTTCATTGATTTCACCTTGAAGAAAATTAGCTAAGTGTTAGTGTTAGATGACAACACCTGCAAAATCTTTTCTTGAAGAACTTCTAGTAGCTTCTCCATGTTTGGAAAAACAGCGTGTATGAGATATGGTACCTGAAGGCTTCAATGGTTTAGGTGCTTCCCTTTCGTGCCCTGTGCTGTAGCTTCTTATTGATAACCGCAAAACACCTTAGAGGCCCACCTGTCTAAGGGAATGGTGGAAATGGATTCGATGCAGTCATGATTTGATGTAGTTTCCAAGTTACGTTTTAAAGAAGATTTGTTGGAGTCTAAATTCAAGTTGTTGGATCTTCAGTCTTCATCTAACTGCTGTAATTGGCCGAGTGAGTAACCGCAGAATCCCCCTAAGTGCAGGGAATCCAGGTCCAGGAATGTTTGATTTGGCACTGAGCATGCTAGGACACACGTCAAACTCACGACTCTAATTTTGTAACCTTGCCATTGAATATGGATTGGAACATGTACTACCACGTAAACAAACATGCACTAACTTTGTAACGCCTTTTCCAATGCCTAACTGTGATGATAAAACAGGGTGACTTGGTTAGATTGTTGGGAAAATAGCTGCTTCCCTCCTACTTGACGTAATTATTACTTTAGAAGTTTTAGTTCGTTTCGAATGATTTATCACCCTTGTGTTAGAGTATATAGCAGTCTGTATATTTGTATTTTCTGTGTGTGCATGTTTATAGCTTCTATGCATTAGTTAGTTTAAGTCTGTTAGAGTTGCAGTTAAGCACCTGCAAGTTAGTTAGAGTATCTAACTCCTTGTACTACTACATAAACGTGAGTTACACAACTCATAAGTTTTTGCTCTCACCAAAAATGAAACCCTTGTGAAATGAAACAATTGGATGACAATTAAATTTGTAAAGGTGCTTTTTCCAAATCCTTGTAACAACTTGTGGATAATCTTGTGTTTTCTTTGTTCCATTCTTACATACTTTTTTTGATGCCTGTATCAGATGAAGACCCCAATATGTTTTGCGTTCATTTATTCATATAAATATACTTTCATGTGCCTGAATTTTTGTTTGTTTCTTCCATAGTTATCCCTCTAGATTTTAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	20	272	5.40E-80
PF07714.20	PK_Tyr_Ser-Thr	21	268	5.40E-42
PF02149.22	KA1	472	514	1.70E-13
PF00627.34	UBA	294	330	2.50E-08
PF14531.9	Kinase-like	125	220	1.50E-07

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:4.2.4:CAMK_AMPK

Gene Ontology

GO term	Description	Category
GO:0035556	intracellular signal transduction	Biological Process
GO:0005737	cytoplasm	Cellular Component
GO:0106310	protein serine kinase activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR015940	Ubiquitin-associated domain
IPR009060	UBA-like superfamily
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR001772	Kinase associated domain 1 (KA1)
IPR028375	KA1 domain/Ssp2, C-terminal

trEMBL

trEMBL term	Description
A0A8B8LDX1	_

SwissProt

SwissProt term	Description
KIN10_ARATH	SNF1-related protein kinase catalytic subunit alpha KIN10

KEGG

KO	Description	Enzyme
K07198	5'-AMP-activated protein kinase, catalytic alpha subunit	[EC: 2.7.11.31]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G01090	SNF1 kinase homolog 10
Medicago sativa L.	MsG0680030852.01.T01	_
Oryza sativa L.	LOC_Os05g45420.2	CAMK_KIN1/SNF1/Nim1_like_AMPKh.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
Cucumis sativus L.	Csa026368	_
Glycyrrhiza uralensis Fisch.	Glyur000119s00012185.1	_
Codonopsis lanceolata	Cl_chr03_35700T	_
Arachis hypogaea L.	AH10G24990.1	SNF1-related protein kinase catalytic subunit alpha KIN10 like

Expression pattern