Gene detail

Detail information of Am09G007110.1 Annotation

Gene ID	Annotation
Am09G007110.1	myb domain protein 16

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am09G007110.1	mRNA	Chr09	30652439	30654338	+

Sequences

CDS:

>Am09G007110.1
ATGGGTCGATCACCATGCTGTGAGAAAGTTGGTTTAAAGAAAGGACCGTGGACTCCTGAGGAAGATCAGAAGCTTTTGGCTTACATTGAAGAACATGGTCATGGAAGTTGGCGAGCTTTGCCACAAAAAGCTGGACTTGAGAGATGTGGTAAGAGCTGCAGATTGAGATGGACAAATTATCTAAGGCCTGATATCAAGAGAGGAAAGTTCAGCTTGCAAGAAGAACAAACCATCATTCAATTACATGCACTTCTAGGAAACAGGTGGTCAGCAATAGCAACACATTTGTCTAAGAGAACAGATAATGAGATAAAGAATTATTGGAACACACATCTAAAGAAAAGGTTAACAAAAATGGGAATTGATCCAGTAACACACAAGCCAAAAAATGATGCAATTCTCTCTAGTCAAGGAAATTCAAAGAGTGCTGCAAATCTCAGTCACATGGCTCAATGGGAAAGTGCAAGACTAGAAGCTGAAGCAAGATTAGTAAGAGAATCAAAACTACGTTCACAATATTCTTCATTACTTGGAATTGGAAATACTAGTATTTTTCCATCAACATCTCCTTCTTCATCATCATCTACTTCAAAACCAGATGCTATATATCCTATACCTTCATCAGATGCTTCAATTGTGAAAGAAGAAGGTGATCAAGAATGGAAAGGTTATGAAAACTTAACCCATTTGACAGAATACAAAGATGGTATAGAGATAGAGAATTTAATGCCTTTTACTTCTACACTGCAACATCATGAGCTGACAATGTTCACGTGGCCTTCCTCTTCTTCTTCTCAACATCATCAAGAGTCTCTTAGGACCACTGTTGCTGAGGAGGAAGAAGGATTCACTAATCTCTTGCTTAATAGTAACTCCGGTGACCGGAGTTTGTCGCCGAAGGGTGGCAGTGGCAGTGGAAGTGATTTCTATGAAGATAACAAGAACTATTGGAATAGTATTCTTAATTCAGTGAACTCTTCACCTTCTGATTTACCCATGTTCTAG

Protein:

Promoter(3k):

>AM09G007110.1
ATGTCATGTGCTTGCTTTCCTTGTAATAATATGACAATTACTTTAATCGACACCTAGATGAACTGGGATGTTTCATTCAAAATTATTTTTGGTACTAGTGTCAATTATAGCTCCATTATTTGCATTAAGAGTTCTCATAAAGCAATAAGCTTCACATGATGTTCATTAAATTAAGACGTTTTTAGATTGGGATCCTATTTATGTTTGCCGTGACAAATGACATAAATTAATGCAACATTATTATGACAATAAGCGTGCCTCCACTTTATAGCGTATTGAGATACTTTTCATTTCTCAAAAGAAATGTAATTCAATACCTATACATATAGTTTCTAGTATATAAAATTTGTAAATGTCTCATGCATACTCCTGTTTTATAATGTGTATATTTCTACACACAAAACTATAGTCATGAAAATGTTTCATTTCTTTTGAAAAATTGATAATATCTCATCCCTTTATAACAGCATGTTGCCTTCATTTAGTTATTGCAAGGGCCTAAAAGTAATAATACACCACTACACCTTCATAGCAAAAGAGGTCGAGATGGATTATAACCATAGATGTTAAAAATACACCACGGTCAAAATGATCCAATTCATTTGGATTGTAGACTAAAGAATATTTGTTTTTTTTATCATGAGACTAAAGAATATTTGTGTTGGCTCATTTTTTAATGTTTTTCTATCATTTTTAAAAAATAATATACATAAAATATATTTACTTTTCTTTTTTATTATCTTTTACATTTTTAAGATTTTTTTGAGTGAATAAACTCACTTAACTTAATAACCGATGATAAATCAAATCAAGTTTATATTTTTTATTTTAACTAAGCCAGACGAGTTATCAAGTAATTTTGGTTCTTGCGCTAACTCGAGTAAGTTAACTAGACACCAAATCGACTTTCTTCTTCTAAATGGATTGGTAAATATTGAGACATGACTTATCTGACTAACTAGGGCTACCTACAAACACCCACGCTCAAGTGAGTCACAGTATAATGGGTGTGGTGACTATGTAAAACGTACCTTGTCTATAGCATCTCTAGTTATATATTCCGCGAGTGTCATGTCTCATAGCTAACACCGGATTTGGTGGGTAAGGATGGAAAAACGGAATCGGTCCGCCAACCCACTTAAAAATGACGAGCCGAATTGGTTTTCTCGACCCACCAACCCATCATTGTGCTCCCCACCTAGTTTGCCAACCTGGTGGGCCACAAACGAACGTGCCTGCCGAGTTTGATTTATTTTTTAAAAATTTTTCCCTTGTTTTAAATCATTTTTTAAAAAAAAATCAATGTTTTTTGGTGGGCCAACCCGCAAACCTGCCATTTTTACCTTGTTTTGGGTAGGCTTGGGCGGGCCAACCCATCAACCCACCCATTTCAGCCTAAAATAATTTTTAATGACCTATTAAATTATTTTGTTTAATGGTGGGCTCGCCTGCTAGCCCACCAACCCGCCAAGGGGCGGGGCAGACTCAAATTCTCGTCCCTTTGATCTTTGGCCAGATAGCTCGTCCTGCCAATTTTTTGGCACGCTCACGATGGGCCGAGCAGAACCGTTTTGCCATCCCTATTGACGAGATTTCGCCCCTATATAATATCTTGACCTTGCCTCGTCGTTGGAGTTTTAGGTCATCATTTGAGTTCCCTAAGCAGGGTCGAAGGTCTAAATCGAACTGTAATGTTCTCGTGTTGGACTTCCAGGATTCGTCAGCGGGTCGCAGCCAGGCTCTCGACGTGCCTTGCTGCTTCACGAGATAGCACAACCCTTTAACTGGCTTTTCCGCACCTCCACGTGTACCACTTGGTTGCAAATAACCTTATTAACGTACATTTCATCCAGATGATCCATATATGCCCCCAACTTGACTAATTGAACCCTAGCTTTGAAATATCAGGCTTCTTATATGCCATCAACTTTTGGCAAACCCTATGAGACTCACGACTCACTATGCCTCACATGTACTAGCTATAATCTCAATTATTTGAAAATTCTCAAATAAGATCTAGAAGATCCCATGAACTCATCACAAACGACTCACTCCCATGTAAATATTCATGTTCATGGTTGCAACATCTCCTTGAATAAAGATCCCATGGATCATATTCCATCATGTTATCATTTGGAAGCTAGGAAGAACCCTAACAATCAGGCCTTGAGTCCCATTCTCCACATATTGCAACTCTTGGATCTCAAGGAAAATATAGACAAACTAATCTCATTGATCTCGATTACCATGTTCTGCGAAGATGATCCAGAGTCTCTTGGAAGTCCTATTCTCCAAACTCTCAACCAGTCTCCAAGGTGTAACTCGAGTGGTTGAGCTAAGACATATGAAGGAGAAAAAAGAGAGAAAGTTGAAGGTTCGATTCATAACTACTAACGTAACTCTTTAACAACTAACGGTAGCATATAAAAAAACTCTCAATTAACCAAACCCTAAAAGAATAAACCTAGAAAAACTACCCCATAAATTTTATGTGAAAACATCCACGAATGAATTAATGTAAATTGAAGCAAGGACCACACAAAAAGTCTTCCCACCAAATGAATAATTAGAAATCGGCACTAGCAAAGGACGCCATAAATTCTTGTTGACGTGTCAGTTGAAAATTGTCGATAGGTTTAAAATTCTCCCCCAAGTAATATTGATATGAAAAAGACATTTTTCATTTCCAATCCATATAATGTATAGTATGTATAGTATATGTATGTATTGCAAATTAATAATACAGCAGGAAACACTGAGTGTAGTGGAGGTAGTGTCCACATATACTCATTGTTGTCAATTATAGTATCTTATCCCATCTATGCCGCTGACCATTCTTCTCTACCCATCTCTCTTATTAATTTATTTTACTAGCTAGAGTCTCCAACTTATATAACCTTCTCTCTCTTTCAATCTTCTTCTTCCTCTTGTGCTTTATATAAAATAAAAAAAAGGAATATATATACTATACAGTGTTTAGCATATTATTATATTTTCCAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	14	61	1.70E-32
PF00249.34	Myb_DNA-binding	67	112	1.70E-32
PF13921.9	Myb_DNA-bind_6	17	77	1.30E-21
PF13921.9	Myb_DNA-bind_6	71	116	1.30E-21

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0000902	cell morphogenesis	Biological Process
GO:0003700	DNA-binding transcription factor activity	Molecular Function
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0010026	trichome differentiation	Biological Process
GO:0090626	plant epidermis morphogenesis	Biological Process

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A1S2XN16	_

SwissProt

SwissProt term	Description
MYB16_ARATH	Transcription factor MYB16

KEGG

KO	Description	Enzyme
K09422	transcription factor MYB, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G15310	myb domain protein 16
Medicago sativa L.	MsG0780036307.01.T01	_
Oryza sativa L.	LOC_Os08g33660.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa009688	_
Glycyrrhiza uralensis Fisch.	Glyur000119s00012162.1	_
Codonopsis lanceolata	Cl_chr03_37940T	_
Arachis hypogaea L.	AH20G32040.1	Uncharacterized protein like

Expression pattern