Detail information of Am09G006700.1 Annotation
Gene IDAnnotation
Am09G006700.1 TATA BOX ASSOCIATED FACTOR II 59
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am09G006700.1mRNAChr092906145229071050+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF07571.16TAF6_C2623491.10E-32
PF02969.20TAF1651.10E-30
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0070897transcription preinitiation complex assemblyBiological Process
GO:0003743translation initiation factor activityMolecular Function
GO:0045893positive regulation of DNA-templated transcriptionBiological Process
GO:0009860pollen tube growthBiological Process
GO:0006413translational initiationBiological Process

InterPro
InterPro termDescription
IPR037796Transcription initiation factor TFIID subunit 6
IPR004823TATA box binding protein associated factor (TAF), histone-like fold domain
IPR046344TAF6, C-terminal HEAT repeat domain superfamily
IPR011442TAF6, C-terminal HEAT repeat domain
IPR009072Histone-fold
IPR016024Armadillo-type fold

trEMBL
trEMBL termDescription
A0A371FTD1 _

SwissProt
SwissProt termDescription
TAF6_ARATHTranscription initiation factor TFIID subunit 6

KEGG
KODescriptionEnzyme
K03131transcription initiation factor TFIID subunit 6

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT1G04950 TATA BOX ASSOCIATED FACTOR II 59
Medicago sativa L.MsG0780036980.01.T01 _
Oryza sativa L.LOC_Os01g32750.1TATA binding protein-associated factor, putative, expressed
Cucumis sativus L.Csa013635 _
Glycyrrhiza uralensis Fisch.Glyur000306s00014019.1 _
Codonopsis lanceolataCl_chr04_18080T _
Arachis hypogaea L.AH14G40800.1Transcription initiation factor TFIID subunit 6 like

Expression pattern