Gene detail

Detail information of Am09G005820.1 Annotation

Gene ID	Annotation
Am09G005820.1	Mitochondrial transcription termination factor family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am09G005820.1	mRNA	Chr09	26754250	26755101	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM09G005820.1
ACACGCGACTGGCTAGTTTAGCATCCATCTTAGGTTTTTAATAGGTAAATTCTCTTTTACTTATCTTGGTGTTCCTATATTTGTAATGGACCACGTTGCTGATAAGATTAAAGTAAAATTACCAACGTGGAAAGCGTTTTACTATATGTAATGGACCACGTTCTTATGGTAAAATTTGTCATTCATGAAATGCTTTTTCACAGTTTTCATATTTATGTTTGGCCTATTAGTATTATTAACCCGTTGGATAAAGGGATCCGCGATTTCATTTGGTTTGGAGATATAAATATTTTGTTTTTTCATACGTACCGGCCAGGGATCAAACCTAGAACCAAAAGATAAGGGACCCAAGTATCTACCACTTGTGCCATGTCATGTTGGTGTCTGACTTAAATCTCTTGCTATGTACTATACATGAGCATTATAAATATAAATGGTTAGCTGAGTGAAGAGGTATTAATATTCAAAAATTATTGTTAAGAAAGTTTGGCATTACTCATTAGTGGCCCGGTGCCAAGAAATTGACTGAGAGCAGTATTTGAAGCACTAGAATTTTCTATGATATTGGTCAAGTCTTCTGTAGACTATGAATGGGTCAGTCAGTCAACCAAGCATCTTTTGAAATATCAACTTGACTCGGTCTCTATGCTAGCTAATTCCTCAATTCACCTCCCCTATATAAACACAAAAATTAAATATATCCAATTAGCTAACATTTGAAACAAATATCCTGTTTCACTTGTTCATCACATCATCAATTGATCCATCATCCATATATTCTTTAGTTTTCCAATTTTCAAATGGCAAATTATGGAACTACACAAAGAATACCCACTTCCTCAACACCTTCATCTCCTGCTACTACTGACACTCATGAACCAAAAGCACCACATGAAAAGATGTACACTGATTTCATATTATATTGTCCAATTAACATTCCATTGACTTCAGAAGCTGCAGCAACTCGCATCATCAGAAACATCGCGAATTTGGGGTTATATTACACACTTTTTGTGTGGATTATACTCTTCTTAACTCTCATTCCTCAACGTAAGGTGTCTTTGATTTTGTTGGTTATTATGACTTATGTGACAACCCTTTATTGTTTACTTTTAAGGGCATTTCCTAATTCTGTTGTGCTTCACAGAATTATTGATAAAAGGTTTGTATTTACTTTGATAGCAATCGCAACTGCACTGCAGCTGATTTTTACTAAAGCAGGTATTCATCTTGCAGTGGTTTTAAGTAGTAGTGTTCCTATTGTTTTGCTTCATGCGGTTTTGTGGGCTAGTTGTTATGAATCTTGTGAGGTTGAGGAAGCTTCTGGTACTAAAGAAGAATTGGCTCCTCTGAACTCCGATGTTGTTTGATTTTATTGACCCTTTAGTTTGCTATATAGGCCCTGTTTGGAAGATCTTATTTTTGAGCTTATGAAAAATAGTTTATGCAAATTTATAAACTTTTGTGTATTATTCATAAGCATGTCAAGGTAGTTTATGAAAAAACAACTTATGAAAATACAACTTTCGTTAGTGAGAACTCATAAATTAACATAAAAACTTATTTATCTCCTTAAGTTGTTTTTCATAAACTTAAAAGTAAACTTTTCGAAACAGGCCCATATTCTAGAGTTCTGTTTGAAAATATGAAGAGGAATAAAATATACCACTATTACAATCAAATGTATACATGTATTATTTTGTAAGAACATGGATATATATGCCAATTCATGATTATCTTGAATAAAATTTGAGGAATATGAAGTGGTGCTTTTATTTTATCCCCTCCCCTGTTTTTAAGTATCATTGTTGAGATATGCTTTCTCTAATAGTTTTGATTATTCATATTTCTGCTTAAAGTAAATTGAGAATAATACAACTATTATTAGTGTCCTTAAAAAAACTATTATTAGTCCCATAATTTGTAATGTTATTGTATTGTAAATACACTTTCTCTTTCTTGCTTGATAGACTCCGGAAATTTAAATGAAATCTCATGAGGGAAACTATTCACATACCTTTTATAGATCTTCTCAAGTGAAAAAAATTGGAGTAAAAACTGGACATAGTATCCTTAAATTTTGTTAGATTGTCTCCCACATTATTTACTCCAGTTTTTTTTTTTCACATGAGAGGATCTAGAAAAAGCATGTGAAAAAAACTATGGCCAGTTTTTTACTCCACACTATTCACATGCTTTTTCTATGGCCAGCTTTTTCTAGATCCTCTCAAGTGAAAAAAACTGGAGTGGGAGACAATCTAACAAAATTCAAGAATACTGTGGCCAGTTTTTACTCCAATTATTTACTCTTGTAGACATGTCACACTTAGGTTAGTACAATGATCCAAGTGTGGCTATAGTAAACCATGCAATTAGAGGTAACACCATAAGAAAGAGTGAAACTATTCACATGCTAATTTTGTTAATAGCATGTGAAAATTAGCATGTGAATAGTTTCACTCTTTCTTATGGTGTTACCTCTAATTGCATGTTTACTATGGCCACACTTGATCCGTGTACTAACTTAAGTGTGACATGTTTACAAGACAATTCAATATTCATCTATTTAAAAGTATTGAAAAGCATCAAGTATATATCGTATTGAATACGTATTGGACACGATACGTCTCCATTTTTAGAGTAGTGGGGTTTCATATCTCACTTGAAGAATTAGTCGTTGTGCATGAAGAGGATATTGGGGTCAAACCAAAAACAATAATTGGAAAAAAAAAATCATATTTTTCAAATCACTGTTATTAAACTTGACTTGGTCATTGATTTTGTTGAGGTGATGAGTCATTGATTCAACAAGTCAAGTCCAGAGTGGACCAATGACCATTCTCCTCTCTATTCCCCTTCATCTTCATGTTTCAATAGTTTTCCAATCTCATATGGACAATGCTATCCTCGTCCATATCCTTCTACCTTATCATCATCACTTCACTTCACTTCACATCACATATGTGAAGCAAATCACAGGAACGAAAAACCGAAACAGAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02536.17	mTERF	131	278	7.70E-36

Gene family

Gene family	Subfamily
Transcription Factors Family	mTERF

Gene Ontology

GO term	Description	Category
GO:0003690	double-stranded DNA binding	Molecular Function
GO:0042646	plastid nucleoid	Cellular Component
GO:0071472	cellular response to salt stress	Biological Process
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0009507	chloroplast	Cellular Component

InterPro

InterPro term	Description
IPR003690	Transcription termination factor, mitochondrial/chloroplastic
IPR038538	MTERF superfamily, mitochondrial/chloroplastic

trEMBL

trEMBL term	Description
A0A1S2XRZ6	_

SwissProt

SwissProt term	Description
MTEF1_ARATH	Transcription termination factor MTEF1, chloroplastic

KEGG

KO	Description	Enzyme
K15031	mitochondrial transcription termination factor family protein

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G18870	Mitochondrial transcription termination factor family protein
Medicago sativa L.	MsG0780039902.01.T01	_
Oryza sativa L.	LOC_Os03g57149.1	mTERF domain containing protein, expressed
Cucumis sativus L.	Csa026794	_
Glycyrrhiza uralensis Fisch.	Glyur000680s00022873.1	_
Codonopsis lanceolata	Cl_chr03_15340T	_
Arachis hypogaea L.	AH14G33400.1	Uncharacterized protein like

Expression pattern