| Gene ID | Annotation |
|---|---|
| Am09G005060.1 | cleavage and polyadenylation specificity factor 73 kDa subunit-II |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am09G005060.1 | mRNA | Chr09 | 24287525 | 24289790 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF16661.8 | Lactamase_B_6 | 21 | 191 | 2.00E-21 |
| PF10996.11 | Beta-Casp | 246 | 365 | 1.30E-20 |
| PF07521.15 | RMMBL | 385 | 443 | 9.60E-16 |
| PF00753.30 | Lactamase_B | 17 | 189 | 2.00E-11 |
| PF12706.10 | Lactamase_B_2 | 27 | 205 | 5.60E-07 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0016180 | snRNA processing | Biological Process |
| GO:0004521 | RNA endonuclease activity | Molecular Function |
| GO:0005634 | nucleus | Cellular Component |
| GO:0010197 | polar nucleus fusion | Biological Process |
| InterPro term | Description |
|---|---|
| IPR011108 | Zn-dependent metallo-hydrolase, RNA specificity domain |
| IPR036866 | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like |
| IPR001279 | Metallo-beta-lactamase |
| IPR041897 | Integrator complex subunit 11, MBL-fold |
| IPR022712 | Beta-Casp domain |
| trEMBL term | Description |
|---|---|
| A0A2Z6LPG4 | _ |
| SwissProt term | Description |
|---|---|
| CPS3B_ARATH | Cleavage and polyadenylation specificity factor subunit 3-II |
| KO | Description | Enzyme |
|---|---|---|
| K13148 | integrator complex subunit 11 | [EC: 3.1.27.-] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT2G01730 | cleavage and polyadenylation specificity factor 73 kDa subunit-II |
| Medicago sativa L. | MsG0180001172.01.T01 | _ |
| Oryza sativa L. | LOC_Os09g23380.1 | metallo-beta-lactamase, putative, expressed |
| Cucumis sativus L. | Csa018205 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000790s00021797.1 | _ |
| Codonopsis lanceolata | Cl_chr01_31490T | _ |
| Arachis hypogaea L. | AH18G28360.1 | Cleavage and polyadenylation specificity factor subunit 3-II like |