| Gene ID | Annotation |
|---|---|
| Am09G004890.1 | transcription regulatory protein SNF2, putative |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am09G004890.1 | mRNA | Chr09 | 23564842 | 23577102 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00176.26 | SNF2-rel_dom | 1000 | 1304 | 6.30E-69 |
| PF00271.34 | Helicase_C | 1327 | 1438 | 1.10E-16 |
| PF08880.14 | QLQ | 477 | 511 | 2.10E-10 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | Others |
| Epigenetic Regulators | CHR2 |
| Transcription Factors Family | Others |
| Transcription Factors Family | SNF2 |
| GO term | Description | Category |
|---|---|---|
| GO:0003682 | chromatin binding | Molecular Function |
| GO:0010199 | organ boundary specification between lateral organs and the meristem | Biological Process |
| GO:1900036 | positive regulation of cellular response to heat | Biological Process |
| GO:0035266 | meristem growth | Biological Process |
| GO:1903798 | regulation of miRNA processing | Biological Process |
| InterPro term | Description |
|---|---|
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR000330 | SNF2, N-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
| IPR036427 | Bromodomain-like superfamily |
| IPR001487 | Bromodomain |
| trEMBL term | Description |
|---|---|
| A0A1S2XQ34 | _ |
| SwissProt term | Description |
|---|---|
| BRM_ARATH | ATP-dependent helicase BRM |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT2G46020 | transcription regulatory protein SNF2, putative |
| Medicago sativa L. | MsG0880043145.01.T01 | _ |
| Oryza sativa L. | ChrUn.fgenesh.mRNA.85 | expressed protein |
| Cucumis sativus L. | Csa000326 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000454s00019925.1 | _ |
| Codonopsis lanceolata | Cl_chr07_10140T | _ |
| Arachis hypogaea L. | AH04G26280.2 | ATP-dependent helicase BRM like |