| Gene ID | Annotation |
|---|---|
| Am09G003690.1 | WD-40 repeat family protein / beige-related |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am09G003690.1 | mRNA | Chr09 | 19520675 | 19562705 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF02138.21 | Beach | 2219 | 2494 | 8.80E-117 |
| PF15787.8 | DUF4704 | 674 | 979 | 1.70E-69 |
| PF15787.8 | DUF4704 | 1153 | 1292 | 1.70E-69 |
| PF14844.9 | PH_BEACH | 2093 | 2191 | 2.80E-26 |
| PF20426.1 | NBCH_WD40 | 2615 | 2827 | 1.50E-21 |
| PF00400.35 | WD40 | 2650 | 2680 | 1.50E-11 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | DWD |
| GO term | Description | Category |
|---|---|---|
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR001680 | WD40 repeat |
| IPR011993 | PH-like domain superfamily |
| IPR023362 | PH-BEACH domain |
| IPR031570 | Neurobeachin/BDCP, DUF4704 |
| IPR046851 | Neurobeachin, beta-propeller domain |
| IPR036372 | BEACH domain superfamily |
| IPR000409 | BEACH domain |
| trEMBL term | Description |
|---|---|
| A0A1S2XPT2 | _ |
| SwissProt term | Description |
|---|---|
| BCHC2_ARATH | BEACH domain-containing protein C2 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT2G45540 | WD-40 repeat family protein / beige-related |
| Medicago sativa L. | MsG0780039497.01.T01 | _ |
| Oryza sativa L. | LOC_Os04g46894.1 | beige/BEACH domain containing protein, expressed |
| Cucumis sativus L. | Csa000292 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000003s00001155.1 | _ |
| Codonopsis lanceolata | Cl_chr07_04880T | _ |
| Arachis hypogaea L. | AH02G26180.1 | BEACH domain-containing protein C2 like |