Gene detail

Detail information of Am09G003100.1 Annotation

Gene ID	Annotation
Am09G003100.1	Leucine-rich repeat protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am09G003100.1	mRNA	Chr09	17787558	17790209	+

Sequences

CDS:

>Am09G003100.1
ATGGTGCCAAAATCCAACCTTTCCACTATACCAATCATCCTACTACTCTTGCTTGTATTACCTCAAACAAAATCTGATCTACATTCAGAAAAACAAGCCCTGTTTGATTTTGCAGCTGCAGTTCATCATGGTGAAAAATTGAATTGGAGTTCTAGTACCTCAATATGCACTTCTTGGATTGGAGTTACATGTACACCTGATGGCTCACACGTGCATTCTATTCGGCTTCCGGGTGTTGGATTACGCGGTTCTCTCTCATCAAACACTCTTGGCAAGCTAAGTGGCCTTATCAGTCTCAGTCTCAGGTCTAACACTTTGATCGGAAACCTTCCGAATGACTTACTTTCTCTTCCTTCTCTACGCTTTTTATATCTCCAATCCAACAAACTTTCAGGTAATATTCCTAACAATCTGCCACCAAAACTTGTTTTTCTTGATTTGTCATATAACTCTTTCACAGGACAAATTCCAAGCCCAATCCAAAATTTAACACATCTAATAGGACTTAACCTACAAAATAACTCTCTTAGAGGGTCCATTCCTAATATTAACCTTCCTAGTCTTAAGAATTTGGATTTGAGTTTCAATTACTTGAATGGTTCAGTTCCTTCAGGGCTGCAAAAATTCCCTGCCTTCTCGTTTAAGGGGAATTTGATGCTATGTGGACAACCTTTGAATCAATGTTCTTTAGTTTCATCTACTCCTATATTGTCTCCACTAATTACCTCTCAAAAACCAAGTCATCTCTCAAACAATAAGAAGATGAGTACATGGTCGAAAATCGCTATTGCTTTCGGTGTTTTTGCACTGATGTTTCTTCCGGTTCTTGTATTAGTATTCTGCTGTTTCAAGAGAAAAAAAGTAGGTGAACAAAGTGTAGCAAATAAAGAGAAAGGGAAGAAACTTGGTGAGGGATTTGGTAGTGGTGTGCAAGAACATGAGAGAAATAAACTTATATTTTTTGAAGGCTGTTCTTATAATTTTGATCTTGAGGATTTGTTGAGAGCCTCAGCTGAAATGCTTGGGAAGGGAAGTTGTGGAACAACTTATAAAGCTATCTTAGAAGAAGGGACAATAGTGGTTGTGAAGAGGCTAAAAGAAGTGGCGGTGGGGAAAAAGGAATATGAACAGCAAATGGAGATTGTTCAGAAGCTTGATCACCATCCAAATGTGGTTCCACCTCGTGCTTATTATTATTCCAAGGATGAAAAACTTATAGTTTATGATTACTTCACATCTGGCAGCTTTTCCAAGTTATTGCATGGAACAAAGGAAACTGGAAGAACTCCACTAGATTGGGATTCCAGATTGAAGATAATGGCAGGAACTGCTAGAGGAATTGCTCATATCCACTCATCAAATGGAACAAAACTTGTCCATGGCAATATAAAATCATCCAATATACTACTCTCAACAAATCTTGAAGGCTGCATATCAGATTTTGGTCTAACACCTCTAACAAGTTTCTGTGTCTCACCAAGAAGTCCACGAGGTTACAAAGCACCTGAAGTTATTGAAAACAGAAAATCAACACAAAAATCTGATGTGTATAGCTTTGGAGTTCTCATTCTTGAGATGTTAACTGGAAAAAAACCAGTTCAATATTCGGGACATGATGATGATGATGATGTTGTTGATCTTCCAAAGTGGGTTCAAAGTGTTGTAAGAGAAGAATGGACTGCTGAAGTGTTTGATCTTGAACTAATGAGATATCCAAATATTGAAGAAGAATTGGTTCAGATGTTGCAACTAGGAATGGCATGTGTAGAAATTATGCCTGACACAAGACCTTCAATGGAGGAAGTTGTTAGGATAATTGAAGATGTAATTGGTTCATAG

Protein:

Promoter(3k):

>AM09G003100.1
GGATCGCCTATTCCATCATACATCTTCAATTTCGGTGGTTTCTCCAAGTGCCTCGGGATCGGACAGTCGTCAATTCTACTTTGAAAGGGCCCCAACGCCTGGAGGATCCACCCCTTTTTGGAGAGTTCCGATAGTGGTACCTACCTGGCGATCTTCTGGAACTTGCTCGCCGACGTTCATGCCTCGGGGATCTAACCCGACTTCTTGACCGTCGGCGAGGTGATGATGAAGCTAGAGACGAAGTTCGCCCCGATGATTCATCCGAATACGACGAGTAATCCGGTGATGACGGGGATGGACTCGGTGGGGAGCGAGAGCCTCGATCCCTCCAGCTTGGGGAAGACCGGCTACCTCGACCTCTCCTGCAGCGAGGTGGAGATCGATGATGGTTCCTTCTCCAAGCCGGGGAGCGACGTCGCCTAGCACTCGTGGTCCTGCGGCGAGGAGATTGCCGACGAGGTGAAAACCGATCCGGCACTCCAATGGTTTGCACCGCAACGAGGGCTGCCTCCATTTGGGAAATACGAATTTCCTAATGGTTATCAGCTTGAACCCGTTGATTCAGCAAATGAACGAGCTGTCGTACATCATCGATTGGAATCGGAACATCTTCCGGAGGAGGGGGGAGACGATTACGTCCCGAGTTCCCTGAGGAGTGAGGGAGCGTTACAACAATTCCTTCCGGGGTAGATTGTGGATGAGCCGAACCTTGCTCACCACTCTGATGGAGCTGAACAGTTCTAGGTCATCCACGAGGTGCCATATCTGGTCAAGGAAAATAGATGAGAGCTAGATATGCTCCCACTGTGGTCGCCAATGTTTAGTACCGTATCACAATATCAGATAGTTGGTAGATCGTTCTTAACCAGCTCGGACCTCGGAGGGGGAGGTGTACCTGTAAAGACACTCTGACGCTCAAGTCAGTAGAGTGAAATCTCTTGCAAGTACTAAACAATGTTTACCTGGTTAAACAATGTTTTCCCCTATTTATAGGGGGTAGGATGACGTCTATGATCATCACAAAACCTTCTGATACGGTCCATTAATGATAATGGGCTTCAATACCGTGGCCCATGAGAGGTCCAAGTTGTTAAGCCCAATCCGAAACACAACTCTTCAATTTCTCATACACTTTTAAGATTTTCTCTTACCCCTTAGTTAACACAAGGATCACCATCCTCTACAATAAAAAATAAATTGTCAAATTGCGTATATGGTATTTCAACTTCTAAAATTATTTTTGTATCATAAATATACCATAAAATATTGAGATATGTAGTTAAATAAGCTATAGATGGTATACAATTGGTCATATTAAGCCAATCTAAAGACACGCTATTTCTTTAAAATATAAATTGACAAAGATGGATAAAACTATTTAGTGATAATAAAAACAAGTTTTATAGAAACATCTTAATATGTTTTACCTGTCTTCACTATTCATTGTATTGGTAATTTCCGTGATACGAGGACGTCAGCACTGGCCAATACCGAGTTTGTTCACTGCGGAAATCGAACCCGGGAGCACCGGGTCGACCCCTGTGTCCCAGGGTAGATTAAGCCACTAGGCCAACAGTGTTGGTTGATGTGACCGTATTTAGTGTTTATTTGTTATTTTGTTTAAGCCGACAAACAAAATCATGTTTTACCTTGATGTCATGTCATGACATTATTTCTTAAAAAAATTGCTAAAATATCTACATAATAAAATATGATTATAAACAAGAATGAAAGTTGAATGTCTACCTCCTAAATCATAAACAAGAATGTAACAAAAAGTAAATATTTTCATATATATGATAGTATAGTGTGATGGTAACCAACACCACCGGCCTAGTGATTTAATCTACCCTGGCATACGGGGAGTCCACCCGGTGTTCACGGTTTGATTTTCGCTGTGAATAAATTTGATGTTGGCCAGTGCAAAATTTAATTCTAAACACAAGCAGATATTAGTCTTTCGTTGAAAGCGACGTTATATTGTAATCGATGAATGGTGCAAACCAAAAAAGTATAGTGTGATAGTAATTGTATAGTACTATAGTATATATTATAATGCTTTTTAATAAGCTTTTCTTTATCTATGTCTCTAGTCATCATGTGTGTGTGTGTGTGATGGTGTCTAAGCGTGTTCCTGAAGCCATGCCGTTAAAGCTTGTCTTTGCTTCCTCTTAGCCGTTGCTACCACCAATCACCAAACTAACATTGCTTTAACAAAAACCTTTTATTTCTCATACTTACATATATTCATTCATTTTCATCTTTTAGTGTCTCTCTCTCTGCGCTTCCATTTCCAACTTTCTCCTGTTTTTCAAGGTAATGAATCTTCTCTACATTATTTGCATTTCTCTTTTCTGCAATTTTCTCTTTTTACATTCTTCATTTTATTGACATAAGACGAAAATCAAATTAATATGTTACATATATAAAACTATAGTCATTAATTTTTTCATGCATTGTTCCTATGTGGTTACTTATAATGATATATAGCTAAGAATATAAATCAAGGATAGTGGAAACTCAGGAAAATTCCTAGTGTGCAGCTAGTTGCACTTTATATGCAATCAAAGTAGAATAAGAATATTCTTTTCATGAATAACATATAACTTAACTATGCTCCTGCAATTGATTGTAGCCAAATTTTTGGACTATTTCTGCCATATGTAAAAAAGTATTGCTCATATCTTCATTTTCATAAATGAGACAAATATTAGCACAGATAGCTGAGAACAGACAAATTCATTGTGTCCGTAAAGCCTGCCACAATTGGTAAAGCTGACTTTGTTAGATCGGATATTTTCCGTGGTTACCTGGGTTCGAACTCAGGATCTCCACGTTGTGTGTGTGAGTTTACGGGTAGTGTTTGTCACTCTGTCGGTAGACTAAAATAAGGACAAATTCATTGTTCTTTTTGTTGCATTGCATGCTTGGTAAATTGTTATGGTTGTTCAGTATGTAATATTTTGGAGTCTCCATTGCTAGGGAAACAAGTGGAACTTG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	339	603	8.30E-38
PF07714.20	PK_Tyr_Ser-Thr	339	604	2.30E-34
PF08263.15	LRRNT_2	29	64	3.00E-08

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.9.3:RLK-Pelle_LRR-III

Gene Ontology

GO term	Description	Category
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0003700	DNA-binding transcription factor activity	Molecular Function
GO:0003677	DNA binding	Molecular Function

InterPro

InterPro term	Description
IPR011009	Protein kinase-like domain superfamily
IPR000719	Protein kinase domain
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR032675	Leucine-rich repeat domain superfamily

trEMBL

trEMBL term	Description
A0A8B8L4Y5	_

SwissProt

SwissProt term	Description
Y5830_ARATH	Probable inactive receptor kinase At5g58300

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G58300	Leucine-rich repeat protein kinase family protein
Medicago sativa L.	MsG0780039445.01.T07	_
Oryza sativa L.	LOC_Os01g60330.1	inactive receptor kinase At2g26730 precursor, putative, expressed
Cucumis sativus L.	Csa011176	_
Glycyrrhiza uralensis Fisch.	Glyur000138s00011664.1	_
Codonopsis lanceolata	Cl_chr06_31450T	_
Arachis hypogaea L.	AH04G22900.3	Probable inactive receptor kinase At5g58300 like

Expression pattern