| Gene ID | Annotation |
|---|---|
| Am09G002880.1 | Pentatricopeptide repeat (PPR-like) superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am09G002880.1 | mRNA | Chr09 | 17201316 | 17202805 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 124 | 174 | 4.60E-62 |
| PF13041.9 | PPR_2 | 160 | 207 | 4.60E-62 |
| PF13041.9 | PPR_2 | 198 | 243 | 4.60E-62 |
| PF13041.9 | PPR_2 | 264 | 312 | 4.60E-62 |
| PF13041.9 | PPR_2 | 353 | 388 | 4.60E-62 |
| PF13041.9 | PPR_2 | 385 | 422 | 4.60E-62 |
| PF12854.10 | PPR_1 | 121 | 149 | 4.50E-57 |
| PF12854.10 | PPR_1 | 159 | 189 | 4.50E-57 |
| PF12854.10 | PPR_1 | 261 | 293 | 4.50E-57 |
| PF01535.23 | PPR | 166 | 193 | 1.90E-49 |
| PF01535.23 | PPR | 267 | 297 | 1.90E-49 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0003729 | mRNA binding | Molecular Function |
| GO:0006397 | mRNA processing | Biological Process |
| GO:0005737 | cytoplasm | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| trEMBL term | Description |
|---|---|
| A0A396H6T1 | _ |
| SwissProt term | Description |
|---|---|
| PPR28_ARATH | Pentatricopeptide repeat-containing protein At1g09900 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G09900 | Pentatricopeptide repeat (PPR-like) superfamily protein |
| Medicago sativa L. | MsG0780039423.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g21780.1 | pentatricopeptide repeat domain containing protein, putative, expressed |
| Cucumis sativus L. | Csa019122 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000132s00015936.1 | _ |
| Codonopsis lanceolata | Cl_chr05_42950T | _ |
| Arachis hypogaea L. | AH14G25990.1 | Pentatricopeptide repeat-containing protein At5g39710 like |