Detail information of Am09G002690.1 Annotation
Gene IDAnnotation
Am09G002690.1 TATA binding protein 1
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am09G002690.1mRNAChr091601250516017217+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF00352.24TBP231041.70E-67
PF00352.24TBP1121951.70E-67
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0016251RNA polymerase II general transcription initiation factor activityMolecular Function
GO:0006366transcription by RNA polymerase IIBiological Process
GO:0005634nucleusCellular Component
GO:0006352DNA-templated transcription initiationBiological Process
GO:0003677DNA bindingMolecular Function

InterPro
InterPro termDescription
IPR012295TBP domain superfamily
IPR033710TATA-box binding protein, eukaryotic
IPR030491TATA-box binding protein, conserved site
IPR000814TATA-box binding protein

trEMBL
trEMBL termDescription
A0A9D4XZH7 _

SwissProt
SwissProt termDescription
TBP_SOYBNTATA-box-binding protein

KEGG
KODescriptionEnzyme
K03120transcription initiation factor TFIID TATA-box-binding protein

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT3G13445 TATA binding protein 1
Medicago sativa L.MsG0780039389.01.T01 _
Oryza sativa L.LOC_Os03g45410.1TATA-binding protein, putative, expressed
Cucumis sativus L.Csa013002 _
Glycyrrhiza uralensis Fisch.Glyur000132s00015970.1 _
Codonopsis lanceolataCl_chr08_32210T _
Arachis hypogaea L.AH08G24710.3TATA-box-binding protein like

Expression pattern