| Gene ID | Annotation |
|---|---|
| Am09G002470.1 | Regulator of chromosome condensation (RCC1) family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am09G002470.1 | mRNA | Chr09 | 14280373 | 14289561 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00415.21 | RCC1 | 363 | 411 | 1.30E-72 |
| PF00415.21 | RCC1 | 416 | 465 | 1.30E-72 |
| PF00415.21 | RCC1 | 469 | 518 | 1.30E-72 |
| PF00415.21 | RCC1 | 534 | 580 | 1.30E-72 |
| PF00415.21 | RCC1 | 637 | 684 | 1.30E-72 |
| PF08381.14 | BRX | 1083 | 1137 | 2.30E-25 |
| PF13540.9 | RCC1_2 | 398 | 425 | 1.10E-24 |
| PF01363.24 | FYVE | 688 | 754 | 3.50E-13 |
| PF13713.9 | BRX_N | 942 | 977 | 1.70E-07 |
| PF16457.8 | PH_12 | 71 | 179 | 7.80E-07 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0046872 | metal ion binding | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR017455 | Zinc finger, FYVE-related |
| IPR011011 | Zinc finger, FYVE/PHD-type |
| IPR027988 | Transcription factor BREVIS RADIX, N-terminal domain |
| IPR000408 | Regulator of chromosome condensation, RCC1 |
| IPR009091 | Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II |
| IPR001849 | Pleckstrin homology domain |
| IPR011993 | PH-like domain superfamily |
| IPR000306 | FYVE zinc finger |
| IPR013591 | Brevis radix (BRX) domain |
| trEMBL term | Description |
|---|---|
| A0A1S2XQT8 | _ |
| SwissProt term | Description |
|---|---|
| PRAF1_ARATH | PH, RCC1 and FYVE domains-containing protein 1 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT4G14368 | Regulator of chromosome condensation (RCC1) family protein |
| Medicago sativa L. | MsG0180001773.01.T01 | _ |
| Oryza sativa L. | LOC_Os01g50470.1 | regulator of chromosome condensation, putative, expressed |
| Cucumis sativus L. | Csa009253 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000190s00015715.1 | _ |
| Codonopsis lanceolata | Cl_chr08_13970T | _ |
| Arachis hypogaea L. | AH04G21550.1 | Probable E3 ubiquitin-protein ligase HERC1 like |