| Gene ID | Annotation |
|---|---|
| Am09G001480.1 | high mobility group B1 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am09G001480.1 | mRNA | Chr09 | 8926957 | 8930061 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00505.22 | HMG_box | 53 | 122 | 5.30E-24 |
| PF09011.13 | HMG_box_2 | 50 | 122 | 1.80E-15 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | HMG |
| Epigenetic Regulators | HMGB1 |
| GO term | Description | Category |
|---|---|---|
| GO:0006325 | chromatin organization | Biological Process |
| GO:0003682 | chromatin binding | Molecular Function |
| GO:0005634 | nucleus | Cellular Component |
| GO:0003677 | DNA binding | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR031061 | High mobility group protein HMGB, plant |
| IPR036910 | High mobility group box domain superfamily |
| IPR009071 | High mobility group box domain |
| trEMBL term | Description |
|---|---|
| A0A2Z6N780 | _ |
| SwissProt term | Description |
|---|---|
| HMGB1_ARATH | High mobility group B protein 1 |
| KO | Description | Enzyme |
|---|---|---|
| K25507 | high mobility group B protein, plant |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G51880 | high mobility group B1 |
| Medicago sativa L. | MsG0780039228.01.T01 | _ |
| Oryza sativa L. | LOC_Os09g37910.1 | HMG1/2, putative, expressed |
| Cucumis sativus L. | Csa018823 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur003610s00041430.1 | _ |
| Codonopsis lanceolata | Cl_chr05_41130T | _ |
| Arachis hypogaea L. | AH14G15950.1 | High mobility group B protein 1 like |