Gene detail

Detail information of Am09G001100.1 Annotation

Gene ID	Annotation
Am09G001100.1	acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am09G001100.1	mRNA	Chr09	6658346	6664110	+

Sequences

CDS:

>Am09G001100.1
ATGGCTTCCTCTTCGGCACCACTTGCTGGTTCCACTGCTTCGGATCTTCTAAGGAGTTCAACTAGTGGTTTCACTGGTGTACCTTTGAGAACCTTGGGAAGGACAGGGTTGGTTTTTAAAAAAAGGGATTTAGCAGTTTCTGCTAAGTTGAGGAAGGTTAAGAAGCATGAATATCCATGGCCTGATAACCCTGATCTCAATGTTAAAGGTGGGGTGTTGAGTCATCTCTCTCCTTTCAAGCCACTCAAAGAGAAGCCAAAGCCTGTCACTTTGGATTTCGAAAAACCTCTTGTTGATCTGCAAAAGAAGATCATTGATGTGCGGAAGATGGCAAACGAAACTGGTCTGGACTTTAGTGATCAGATTCTCTCATTGGAGACTAAGTACCATCAGGCTTTAAAGGATCTATATACACATCTAACTCCTATACAGCGGGTCAACATTGCACGGCATCCTAACAGGCCAACTTTCCTTGATCATGTTTTCAACATAACTGAAAAGTTTGTGGAACTCCATGGTGATCGAGAAGGTTATGATGATCCAGCCATTGTTACTGGTATCGGGAGTATAGATGGTAAAAGCTACATGTTCATAGGCCACCAAAAGGGTAGAAATACTAAAGAAAACATTCAGCGTAACTTTGGGATGCCGACTCCACATGGTTATAGGAAGGCTTTACGCTTGATGGAATATGCTGATCATCATGGGTTCCCAATAGTTACCTTCATTGACACACCCGGGGCATATGCTGACCTCAAATCAGAAGAGCTAGGCCAAGGTGAAGCAATTGCTCATAATTTGAGATCCATGTTTGGTCTGAAGGTGCCAATTGTGTCTATAGTTATTGGGGAAGGTGGATCTGGTGGTGCCCTTGCCATTGGGTGTGGTAATAAATTACTCATGCTTGAAAATGCAGTTTTCTATGTTGCCAGTCCAGAGGCATGTGCTGCAATCTTGTGGAAGAGTGCTAAAGCTGCTCCAAAGGCTGCTGAGAAACTGAAGATTACAGCGCCTGAACTGACCAAATTGCAAATTGCAGATGGCATTATACCTGAGCCCCTCGGTGGTGCACATGCAGATCCACAATGGACCTCTCAACAAATAAAAATTGCAATCAAAGAAGCTATGAATGAGCTCACCAAGATGAATACAGAAGACCTATTAAGAGATCGCATGCATAAGTTCCGAAAACTTGGTGGGTTCCAAGAAGGAGCTCCTGCAGATCCTAAGAGGAACTTCAGCATGAAGAAGAAGGATCCACCTGTTGCTACAAAGATTTCCGATGCTGAATTAGAGGTTGAGATTGAGAAACTAAAGCAAAAAATTTTGGATGGTAAAGAATCCTCTTCTGAGCCTTCAAAACTCAATCTGGATGAGATGATAAAGAAACTGGAAAAGGAGGTTGATCAAGAATTCTCCGAGGCGGTTAAAGCCATGGGCTTAACAGACAGGTTGTCGAAACTACGGGAGGAAGTTTCAAAAGCAAGTTCAGATAACCAAACTATTGATCCATTGCTGAAGGATAAGATAGAAAAGCTAAAGGAAGAGTTTGATCAGGGTTTATCAGCAGCTCCTAATTCTGGCAAGTTGCAGAAGAAGCGTGACATGCTGAAAGAATTGTCTAAAGCAAAGCTTCAATTAGATAGAAACAAAGAAGCTGCAACACTTAAGCAAGAATTGAAGAAAAAATTCGATGAGGTCATGAGTATTCCTAGAATAAAGGAAAACTACGAAGCATTACAGGCCGAAATTCAACGTGTTGGTGCATCCTCACCAAGCGATTTGGATGATGAATTGAAGAAGAAAATCATCGAGTTCAACAAAGAGGTAGACTCACAGCTGGTTAATGCTATGAAGTCGGCAGGATTAGATGTTGAGTTTGTAAAACCGGGACGAGATGGCAACAAGTCTTCGGTGCCAGAGTCAGAGATAGAAGAACTAAACAAAGATGTAAAAAAGGAAATTGAAAATGTGGCAAACTCGTCAGCAGATATTAAGAACAAGATAGAACAATTGAAACTGGAGGTTGCCAAGGCTGGAGAGACACCTGATTCAGAATCAAAGAATAGAATTGATTCTTTGGTGCAACAAATTAAGCAGAGCCTTGCAGAGGCCATTGACTCGTCTAGCTTGAAAGAGAAGTATGAAAATTTGGTCTCCAAGGTTTCCAGTGAATCTGAAACTTCTGGAGAGTTTGATGGAAGTCTAGGAGACAGTCTCACTGATGAAGAGTTGAGAGAGAAAATTGGTGCAAACCGCACCTTTTCATAA

Protein:

Promoter(3k):

>AM09G001100.1
AAAATTTTGTCACGGAACCAGAAATGCAATTCATTTGCAAACAATGGAATGAAACCCTAACGTGAGTAAAACTCACCGATTTTGCGAATTCGCGAGAAATCACGTCGGAGTACGAAACGATCGGACGGTAACCTCTCGAACAATCCCCGTAATCACGAGCTCGTACCGAACTCGTCCAAACACTTCAACAATCGAATCCCCAACTTTCTCAATCTCGAAACCAGCAACTGAAACACCTCAATCTCTTCTCCAATCCACAATGTAGGTTCAGTTCTTCCTTACTTGGCCTTCACTTGAACATGCAAGGCTCTTATGAGCTCAAAACTCCATTAATGGCCAAGCTTGAGCTTCAAATTTCGAATTTAGTAGGAGAAGAAAGAAGAAGAATCAGCTACTGTAAATGGTGTCATTGGAAAGAGAATGAAAAATGGAGAAGAATGGTGGTCTTGATACTTACATGCAAAAGGGTTGGATGGTGATGGAGTTCCTCTCCTCTTCTCCTCCTTCGCCCCACTCTCCTCCTATTCTTTTCTTTTCTTTCTTTGACTTCAGCTGGAAATGAGAGTGAAGAGAGGATGATAATATTTTAATGGGCTGAGGGTTAAATGATTGGAAAAGACCAAAATACCCTTGGCTCATTAATTCATTCAAATCCTTATTTTTTTGCCTAAGTTTTCTCCTACTTAGCCATAACTTAACGTTTTCTCGGCTAACCCATATCCGATTCACGTATTATTATTTCACTCGTCTAAGATATTATTTATAATCCCCGTGAATCGCATTTTAAAAATTAGGGATGTTACACAATCAATAGTACCTTCCATAGTATACACATTTCATTATATTGACCTCAAAAAACGGAAAACTAAGACTTCAATCAAATTCAAATTGAATTAAAAAAACTGCAGATATGTAAAAGCATACTTCAAATAAGCATAACCATATGCATAGATAAGTAAGAATTATCCAATTACAATAACTATCCAAGATTCAAATACATAAAGATGTAAATGTCATAAAACATCTCTAAGGGTGCATGTTAGAGGGCTCCCCTAAACTATCCTTGTCTCTTTTACTTTGAATTAAAAGCTCCGTATATGGTGTGACATAATTTCAAACAGAATCATTTCTCACAAAAACCAAGTTTGTTATCAGATTTGCATCAAATAAAGGACATGGTAACAAGTTATAATGTCTATATATCCTATATTTATTCATCTCCCTTATCAGCTTACTTTTCTTTTTAAATTTCGCATTTACAACAATCTTAATTGATACAACATATACATATTTAAATAGTAGATACAATTATTAAATGTTTTTGGTGAATTAGATACAATTATTAAATTATCAAAAAAAGTTGATACAGTTATTATCAACTTATAAGTAATATAGTCATCATGCATTAAATGCACTATACTGATTTATGTAGAATCAATCCAATTGATTTTATCCCTCACAAAAAAAAATCTAAATAGTGTTTTTTTGACAAAAAGTCCAAATGATCTTCTTTTTCAAAAAGTTTCGAATGGGATAAATCAAAAAACTATGCATATCAATCCTATAATATTTAGTCAAAAAAATCCTATAGTATAATATAGTTTCAAATTTTACAATTAAATTACTTTAATAATAATATTTAATTTAAATATGTTTTAAAATTTTTTTGACAAACGAGTTTTTCTAATTTGAAAATTACCATTGAGTAAACGTGTATTACAATCTCACAAAAGATACAAGTTAGTAAGTAGCTAATTAATTTAAATATTGACAAAAAGAGTAGCTAATTTAACATGAAAGTATTATCTGGCATAGTTTTATTTTATGTCTACTAATTAGGTATATAAGAGTTAACCAACACCGTTGGCCTAATGATTTAATCTACCCTGGGGTCGACTCAGTGCTTCCGGGTTCGATTTTCGCAGTGGACAAATTTGAAATTTGATTTAAGCACGAGCGGAGATTAGTCATTCGCCAAAAAAAAGTTATATAAGAGTTTTTCTCCTCAACTATAATTGATTGGGGATAACACGCATCACAAGCCGATGCAACATTCCTATTTATCTCAGTTGCATTGCATGTGTTATGTTGTTTTTTTTGACAACATGTGTTATGTTGTTGATGATGTCAAAAGAGTTGTTACAATTTACAAAGAGTTTTGTTGTTATATTGTGTTGTGGAGTATCTCTTCCTTAACGGCCAAACCGAAAGGAGCTGGCTCATTCATTATTGTAATCGTAACAAAACGGAGTAGCATAAGAATTATCGCCCCCCTTTCTCACTCACTACTTTGGCTTTTTCTTCTTTTCTTTCTTTCAATTCAACACAAACAAACCCCAATCTCTATTCTCTATTCATCTTTCACACACACACACACTACCAACAACAAACAACAACAACTCCCTCCTCTTTCTTGACGATCTCTACGAAGTTAATTACTATTCACAACCCCTCTCTTTCTCTCTCTATCTCATTCCTTAATAATCCCACTCTCATCTCGCATTCTCTCTCTCGCCTATTTTGGATCTTCAACTTCTCACTGGTAATTTACCTTCCCCCCTTTTCTCCCACCAAAATGGAGATTCTTTTCCTTAATCTGAGGAGCTTATTTCATCGCTTTTCAAGTTCTTCATGAGTGATTATTCTATCTTTTGATTATGTGAATTTGAAGTATCTTTCTCAATGTTGCTAGGATTTTGTCGATACGAAGCTTAGTTTAGTGAAGTTAATTGGTTAATTGAAGGTTTCATTTTTTGATGATTTGGATCGAGATGAAGTTTTTTCTTTTTTGTAATTTTTTTTTCAATCTTTTTTTGGATTCCTTTTCTAGGTTTTGATTATTTTGTCTTCCTTTTTAATAAAGTAGAGTTTTTATTATGTGTATTTAAATATTTAGATACTCTTAGTGATCTTTTTTTGGGGTTTATTGTGTTTTGCTTTTGTTTTAGATTTTGCTGATTTGGGGGATTGAGTTTGAAGGACTAATCTTGGTGGGGAAAT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF03255.17	ACCA	91	233	9.80E-56
PF01039.25	Carboxyl_trans	170	335	1.50E-08

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:2001295	malonyl-CoA biosynthetic process	Biological Process
GO:0016743	carboxyl- or carbamoyltransferase activity	Molecular Function
GO:0006633	fatty acid biosynthetic process	Biological Process
GO:0009507	chloroplast	Cellular Component
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR029045	ClpP/crotonase-like domain superfamily
IPR011763	Acetyl-coenzyme A carboxyltransferase, C-terminal
IPR001095	Acetyl-CoA carboxylase, alpha subunit

trEMBL

trEMBL term	Description
A0A1S2Z3T0	_

SwissProt

SwissProt term	Description
ACCA_ARATH	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic

KEGG

KO	Description	Enzyme
K01962	acetyl-CoA carboxylase carboxyl transferase subunit alpha	[EC: 6.4.1.2 2.1.3.15]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G38040	acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit
Medicago sativa L.	MsG0780039155.01.T01	_
Oryza sativa L.	_	_
Cucumis sativus L.	Csa017939	_
Glycyrrhiza uralensis Fisch.	Glyur000238s00016786.1	_
Codonopsis lanceolata	Cl_chr05_43400T	_
Arachis hypogaea L.	AH04G18860.1	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic like

Expression pattern