| Gene ID | Annotation |
|---|---|
| Am09G000120.1 | zinc finger (C3HC4-type RING finger) family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am09G000120.1 | mRNA | Chr09 | 743126 | 744145 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF06547.15 | DUF1117 | 238 | 330 | 1.30E-29 |
| PF14369.9 | zinc_ribbon_9 | 8 | 43 | 1.20E-12 |
| PF13639.9 | zf-RING_2 | 173 | 215 | 6.60E-11 |
| PF13923.9 | zf-C3HC4_2 | 173 | 214 | 2.40E-09 |
| PF12678.10 | zf-rbx1 | 170 | 215 | 4.00E-08 |
| PF17123.8 | zf-RING_11 | 173 | 201 | 6.30E-08 |
| PF13445.9 | zf-RING_UBOX | 174 | 212 | 3.70E-07 |
| PF00097.28 | zf-C3HC4 | 174 | 214 | 4.80E-06 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | RING |
| GO term | Description | Category |
|---|---|---|
| GO:0061630 | ubiquitin protein ligase activity | Molecular Function |
| GO:0016567 | protein ubiquitination | Biological Process |
| GO:0005737 | cytoplasm | Cellular Component |
| GO:0046872 | metal ion binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR001841 | Zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR039525 | E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon |
| IPR010543 | Domain of unknown function DUF1117 |
| trEMBL term | Description |
|---|---|
| A0AAN9PCB9 | _ |
| SwissProt term | Description |
|---|---|
| RDUF1_ARATH | E3 ubiquitin-protein ligase RDUF1 |
| KO | Description | Enzyme |
|---|---|---|
| K11982 | E3 ubiquitin-protein ligase RNF115/126 | [EC: 2.3.2.27] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G46620 | zinc finger (C3HC4-type RING finger) family protein |
| Medicago sativa L. | MsG0480021031.01.T01 | _ |
| Oryza sativa L. | LOC_Os05g01940.1 | zinc finger, RING-type, putative, expressed |
| Cucumis sativus L. | Csa011682 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000359s00016721.1 | _ |
| Codonopsis lanceolata | Cl_chr03_41420T | _ |
| Arachis hypogaea L. | AH13G04840.1 | Uncharacterized protein like |