| Gene ID | Annotation |
|---|---|
| Am08G008950.1 | Pectin lyase-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am08G008950.1 | mRNA | Chr08 | 94118692 | 94124520 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00544.22 | Pectate_lyase_4 | 187 | 366 | 2.30E-19 |
| PF13229.9 | Beta_helix | 200 | 323 | 2.10E-06 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GTnc |
| Carbohydrate-Active enzymes Family | PL1 |
| GO term | Description | Category |
|---|---|---|
| GO:0030570 | pectate lyase activity | Molecular Function |
| GO:0045490 | pectin catabolic process | Biological Process |
| GO:0046872 | metal ion binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR011050 | Pectin lyase fold/virulence factor |
| IPR012334 | Pectin lyase fold |
| IPR045032 | Pectin lyase family |
| IPR002022 | Pectate lyase |
| IPR018082 | AmbAllergen |
| trEMBL term | Description |
|---|---|
| A0A1S2Z5T6 | _ |
| SwissProt term | Description |
|---|---|
| PLY15_ARATH | Probable pectate lyase 15 |
| KO | Description | Enzyme |
|---|---|---|
| K01728 | pectate lyase | [EC: 4.2.2.2] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT4G13710 | Pectin lyase-like superfamily protein |
| Medicago sativa L. | MsG0180001988.01.T01 | _ |
| Oryza sativa L. | LOC_Os04g05050.1 | pectate lyase precursor, putative, expressed |
| Cucumis sativus L. | Csa001077 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000033s00008628.1 | _ |
| Codonopsis lanceolata | Cl_chr08_37040T | _ |
| Arachis hypogaea L. | AH12G21230.1 | Probable pectate lyase 15 like |