| Gene ID | Annotation |
|---|---|
| Am08G008010.1 | _ |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am08G008010.1 | mRNA | Chr08 | 87282819 | 87285311 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF01535.23 | PPR | 189 | 217 | 7.00E-59 |
| PF01535.23 | PPR | 220 | 249 | 7.00E-59 |
| PF01535.23 | PPR | 250 | 278 | 7.00E-59 |
| PF01535.23 | PPR | 352 | 381 | 7.00E-59 |
| PF13041.9 | PPR_2 | 84 | 131 | 1.20E-58 |
| PF13041.9 | PPR_2 | 185 | 217 | 1.20E-58 |
| PF13041.9 | PPR_2 | 217 | 249 | 1.20E-58 |
| PF13041.9 | PPR_2 | 248 | 295 | 1.20E-58 |
| PF13041.9 | PPR_2 | 348 | 395 | 1.20E-58 |
| PF12854.10 | PPR_1 | 184 | 213 | 1.20E-32 |
| PF12854.10 | PPR_1 | 349 | 377 | 1.20E-32 |
| PF20431.1 | E_motif | 466 | 529 | 1.10E-20 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0009451 | RNA modification | Biological Process |
| GO:0003723 | RNA binding | Molecular Function |
| GO:0043231 | intracellular membrane-bounded organelle | Cellular Component |
| GO:0004519 | endonuclease activity | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR046960 | Pentatricopeptide repeat-containing protein At4g14850-like, plant |
| IPR002885 | Pentatricopeptide repeat |
| IPR046848 | E motif |
| trEMBL term | Description |
|---|---|
| A0A1S3EH59 | _ |
| SwissProt term | Description |
|---|---|
| PPR15_ARATH | Pentatricopeptide repeat-containing protein At1g06143 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G06143 | _ |
| Medicago sativa L. | MsG0880045133.01.T01 | _ |
| Oryza sativa L. | LOC_Os07g44299.1 | pentatricopeptide, putative, expressed |
| Cucumis sativus L. | Csa001119 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000483s00030630.1 | _ |
| Codonopsis lanceolata | Cl_chr06_36670T | _ |
| Arachis hypogaea L. | AH18G30840.1 | Pentatricopeptide repeat-containing protein At1g06145 like |