Gene detail

Detail information of Am08G007100.1 Annotation

Gene ID	Annotation
Am08G007100.1	SKU5 similar 3

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am08G007100.1	mRNA	Chr08	79320962	79326855	-

Sequences

CDS:

>Am08G007100.1
ATGCGATCATTATCTTCTTTGTTCTTTGCAACATTTCTATGTATATTCTTAGATGCTGCTTTAGCCGGTGACCCTTTTGTTTACTATGATTGGACTGTGTCTTATACCACAGCTTCCCCACTTGGAGTCAAACAGCAGGTAATTGGGATCAATAGTAAATTTCCAGGAGAAATTCTAAATGTCACCACAAACTGGAATGTTGTTGTCAACGTGAAGAATGATCTTGATGAACCCTTACTTCTGACATGGAACGGTGTACAGCATAGGAAAAACTCCTGGCAAGATGGAGTTTCAGGAACTAATTGTCCAATTCCAGCTGGTTGGAACTGGACATACCAGTTTCAAGTTAAAGATCAAATAGGGAGTTTTTTCTACTTCCCTTCCCTAAACTTCCAGAGAGCTGCTGGAGGATATGGAGGAATTATCATAAACAATCGACCAGTTATTCCTGTTCCCTTTGGATTGCCAGATGGAGATATTACAATTTTTCTGAGTGACTGGTACACCAAGAGTCATAAGGAACTCAGGAAGGATGTGGAAAAGGGCGCTGACCTTGGAATCCCTGATGGTGTGCTTATTAACGGACTCGGTCCTTATCGCTATGATGACAATATCGTCCCAAACGGCATTTCTTACCTAATAGTAAATGTGGAACCGGGGAAAACGTATCGCCTTCGGATTCACAATGTTGGTATCTCAACAAGCTTGAATTTTAGGATACAAAATCACAACTTGCTTCTCGTGGAGACCGAAGGATCATACACAGTCCAGCAAAACTACACAAACATGGATATCCATGTGGGTCAGTCATACTCATTCTTGGTTACGATGGATCAAAATGCCAACACTGATTACTATATCGTTGCCAGTCCTCGGTTTGTTAATTCATCATGGGCTAGATCTACTGGAGTTGCCATTTTGCACTACGCCAACTCTCAGGGTCCTGCATCAGGTCCTCTTCCTAGTCTTTCTGATCAAGATGATCCTTCTTTCTCTATAAATCAAGCAAGATCGATAAGGTGGAATGTGTCTGCTGGTGCAGCGCGTCCAAATCCACAAGGTTCTTTCAAATATGGTGACATTACTGTGACAGATGTATATTATATAGTAAATAGACCTCCAGAGCTTATAAATGGAAAGTGGCGTACTACCCTTAATGGTATATCATATTTCCCACCTTCAACCCCCTTGACACTTGCGCAACAATTTAAAATTCTCGGGGTGTACAAGCTTGATTTTCCAAATAGATTGATGAACAGACCTCCGAAAGTTGATACCTCTCTCATTAATGGCACTCACAAAGGTTTTATGGAAATAATCTTTCAAAACAATGATACCACAGTCCAGTCCTACCATCTGGATGGCTATGCATTCTTTGTTGTCGGCATGGATTTTGGAGTATGGTCAGAAAATAGCAGAAGTACTTATAATAAGTGGGATGGCGTGGCTCGCAGCACTACGCAGGTCTTTCCTGGGGCTTGGACAGCCATTTTAGTATCTCTCGACAGTGCTGGCATTTGGAACCTTCGTGCAGAGAACCTCAACTCTTGGTATCTGGGCCAAGAAGTTTATTTGCATGTTGTAAACCCAGAGAATGATACTGATGGTAATTCTTTACCTGACAACGCAATATACTGTGGCCTACTTTCTTCCCTTCAAAAGGAGCAATCTCACAAGTTCCAGTTCTCTTTGGGATCACCTTTCTGCAGTAATTCTAGATTGGTATTATTCATGTTATTATTCCTTGCTCTTGAAAGTTTTTATGGTATGTGGAGTGTTGAATTTTTAATCAACTAA

Protein:

Promoter(3k):

>AM08G007100.1
CTTCCATTCAACTTAGCGCTTCCAATCATCCTCTTCGGTGGGATATTCTACAAAAAATAGTCAATGCCATCAAATATTTCTCTACATTGGCTAGTCTCAGCCAATTGTCCTACAGAAATGATATTAGATTTGAATCCAGGAACATAAAAGACATCATATAGAGTAAGGAATGGAGATAACACAACAGTTCCTTTGATGCAAGAGAAAGTAGTGTGGCCACTTGGTAGATTGATGGAAACAGGCTTGATGTGTCTATAGGATGCAAAGAGTGTAAGAGAGGAGCATACGTGATCTGTTGCACCGGTGTCAACAAGCCAAAGGATAATGAAATTACCTTCCTCGGTATAATCAGTAGCTATGTGATGTGCACTAACCATGTTAGTGGATATGGTGGCCGTAGGTGCACCGGAAGGAATGAGGGACAATAGGCTTTGAATTTGTTCCGTAGTGAGGCTCAAGATAGGATTGCTCTGTGAAGCATCAGAATTAGAGTCTGTAGCAACATGATTAACCGATTTCTTGGTCTTAAAACCGGGAGGATAGCCATGCTTCAAGAAGCACGTGTCCACGGTGTGGTTCGTTCGATTGCAAAATGTACAAAGACGATTACCACGTTGAGGAGGCTTGCCTTTGCCACGGCCTTGAGCAGTAGGACGTTCTTGCTGAGTAGTAACGTTGGCAACCAATGAATCAGGTGTGACCGAAGGACCAATTTGGCGTTCTTGCTGAATGATCATGGAGTACACCTTAGATAATGAAGGCAATGGTTCCATGAGTAAGATTTGAGAACACACAGAGGCATAGTTCTCATTCAGTCCTTGCAAGAAGCTCATAACGGAGTCACGGTCACGATACGCAGTAACGGTGCGCGAAGTATCACAGCAACAACCAGTAGAAGAATTGCATAGGAATTGGAATGAAATTAGAGAGTTCATCCCACAACACACGCATTTTAGTGAAGTACTAACCGAAAGATCTGCTTGCTTTAGAGAGAATATCTCTTGTTGGAGATGGTAGATGTGAGTGTTGTCGTCTTGAGAAAAACGATTCCAGAGTTCCTTCCAAACATTGTATGCCTCGGTGATCCATAAAATGCTGGAGGAAATCTCTGTAGAAACTGAATGATTGATCCAAGCCAGAACAAGCATATTGCAGCGCTTCCACTTCGGAAAGATCGGATCGGAGACGAGAGGTTTTGCAATCGTGCCATCGACGAACGCAAATTTGTTCTTCATTTCCAATGCCATTGTCATAGCTTGAATCCAACAATGATAATTGTTGCCTTCAAGAACCGGAGTAACCAGCTTCAACGATGGATTTTCGTTATTGGGGATGAAGTATGGATCGGAAGCGTCATCGTGGCGTGATGAGGAACGGCGGCGTCGTGGTGGAGGAGAAGGAGAACGCGATTCAGAAGAACCAGATGATTTTGAATCGGAGGAAGCCATTAAAGGTGAAGAGAAGAAGCAATCGAAGATCGATTGAAGAGAAGAGAAACAAATTCAGCAAGAAATCGCAAAGAGAAAGGGATTAGGGTACGCAAGATTGCGAAGGGAAATCAGAGAGAATATGCGGAATTTTCAACTGATACCATGTAAGAGTGGATAAAATGAAAACTTGATCATTGATTTGTTGCCAATGGCATATATACAGAGTCAAATACAGATTGAGCAGTTAGCTCTCTAACCGAATGGAAAACAGAAAATGTAACAGACTAATTAGCTACAGGTATCTGTAGTAAATAAACTTAACTCTAGTTAAAGAGACTAACTAAAATTGAAAATCAATTAATATTACAAGATGTAAAAATATATGGCTAAACTGCTCCTGGGGTCCCTTATCTTTATTTAAAGTAACAAATTAGTCCTTTATGTTTTTTTTGTCCCAAATAAGTCCTTTATCTTTCAAATTTTTGACACATAAATCCTTTTCCGTTAACAGTGCTGATTTATGTGTCAAAAACAAGGATTTATGTGTTAAAAATTTGAAACATAAAGGACTGATTTGGGACAGAAAAGGATTTATGTGTCAAAAATTTAAAACATAAAGGACTGATTTGGGACAAAAAAAAGATAAAGGACCAAATCGTTACTTTAAATAAAGATAAGGGACCCCGGGAGCACTTTAGCCAAAATATATCTAACATACCACAATGGGCGACAAAACTCTCCTTTAAGAGTTTTAACGTTGCAGCATTCCCAATACTGAATTCGAACCTAGGAATTGGTTAAGCTGATAGAGACTCAAACCATCTCATACAAGTGTTCTTGAGTACTATAAAATTGATTCTAATTTGTAGCTTGGATTTCTAGTTTTTGCTTCAAAAGTGATTTTTACTCTCATTTTTGTTGTTCAACTCTCTTTTACTTAAATTCTTTCATACATAAATAACTTTACATTCAAAATCATTTTTACATAACTAATTCATTCATAATATATTTTTAATAAGAAAATATTAATATATTAATTATTATGTTTTTTATAAAATTATTAATTATTATGTTAATTTTTCTCCTTCACCATAATTAATTTTCGTCACTACAAAAATACACAAGCCCATTTTGTAAAAGACTTCACCTCCTTAGATTACACATGTCTGCCTCTATTAGGGCAGGCTGGTGCAACTTTTTTATTATAAAAAAAATTATTGGACTGTGTGTCATTTAATCATTAATAATCATTTCATAACACAAGGAAGATGAGCGCAATTTCCAGATTTGTTTTTTCACTGGCAAACTTTTAAATTCTCTTCAACTATTGAAAAGCAAAAACCTCAATATTTTTGAAAAGAGTTATGACGAGAAAAGGAATGCCAATAAGTCAAGAAAAGTAAAACTTTGGGACCCAATACAAAACACAAGAGTCAGAAAGTGACTCCTCTCTGGATCTCCCATGTGAATATATGCACAGAACTGGCAACTTTGCTTATTGAAGCTTCCTCTCTCTCTATTTCTCTTTCTGCACAAAACTTGAGAACAGATTCATTGAGGAACAAACAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00394.25	Cu-oxidase	159	311	6.50E-43
PF07732.18	Cu-oxidase_3	33	146	3.60E-40
PF07731.17	Cu-oxidase_2	396	531	4.80E-25

Gene family

Gene family	Subfamily
Transporter family	ILT

Gene Ontology

GO term	Description	Category
GO:0005507	copper ion binding	Molecular Function
GO:0005886	plasma membrane	Cellular Component
GO:0006508	proteolysis	Biological Process
GO:0016491	oxidoreductase activity	Molecular Function
GO:0004185	serine-type carboxypeptidase activity	Molecular Function

InterPro

InterPro term	Description
IPR001117	Multicopper oxidase, second cupredoxin domain
IPR011707	Multicopper oxidase, N-terminal
IPR011706	Multicopper oxidase, C-terminal
IPR045087	Multicopper oxidase
IPR008972	Cupredoxin

trEMBL

trEMBL term	Description
A0A151SII9	_

SwissProt

SwissProt term	Description
SKU5_ARATH	Monocopper oxidase-like protein SKU5

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G48450	SKU5 similar 3
Medicago sativa L.	MsG0780038332.01.T01	_
Oryza sativa L.	LOC_Os01g01030.1	monocopper oxidase, putative, expressed
Cucumis sativus L.	Csa019320	_
Glycyrrhiza uralensis Fisch.	Glyur000919s00033053.2	_
Codonopsis lanceolata	Cl_chr06_32580T	_
Arachis hypogaea L.	AH03G14010.1	Monocopper oxidase-like protein SKU5 like

Expression pattern