Detail information of Am08G005840.1 Annotation
Gene IDAnnotation
Am08G005840.1 TATA binding protein 2
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am08G005840.1mRNAChr086358503363590211+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF00352.24TBP211042.20E-21
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
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InterPro
InterPro termDescription
IPR012295TBP domain superfamily
IPR000814TATA-box binding protein

trEMBL
trEMBL termDescription
I1L727 _

SwissProt
SwissProt termDescription
TBP2_ORYSJTATA-binding protein 2

KEGG
KODescriptionEnzyme
K03120transcription initiation factor TFIID TATA-box-binding protein

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT1G55520 TATA binding protein 2
Medicago sativa L.MsG0780039389.01.T01 _
Oryza sativa L.LOC_Os03g45410.1TATA-binding protein, putative, expressed
Cucumis sativus L.Csa013002 _
Glycyrrhiza uralensis Fisch.Glyur001266s00035003.2 _
Codonopsis lanceolataCl_chr08_32210T _
Arachis hypogaea L.AH08G24710.3TATA-box-binding protein like

Expression pattern