| Gene ID | Annotation |
|---|---|
| Am08G005540.1 | pescadillo-related |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am08G005540.1 | mRNA | Chr08 | 54176904 | 54184060 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF06732.14 | Pescadillo_N | 10 | 269 | 3.70E-107 |
| PF16589.8 | BRCT_2 | 345 | 432 | 4.20E-08 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0000466 | maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Biological Process |
| GO:0030687 | preribosome, large subunit precursor | Cellular Component |
| GO:0003723 | RNA binding | Molecular Function |
| GO:0005654 | nucleoplasm | Cellular Component |
| GO:2000232 | regulation of rRNA processing | Biological Process |
| InterPro term | Description |
|---|---|
| IPR010613 | Pescadillo |
| IPR036420 | BRCT domain superfamily |
| IPR001357 | BRCT domain |
| trEMBL term | Description |
|---|---|
| A0AAN9KS06 | _ |
| SwissProt term | Description |
|---|---|
| PESC_ARATH | Pescadillo homolog |
| KO | Description | Enzyme |
|---|---|---|
| K14843 | pescadillo |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G14520 | pescadillo-related |
| Medicago sativa L. | MsG0880042050.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g49210.1 | BRCA1 C Terminus domain containing protein, expressed |
| Cucumis sativus L. | Csa007031 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000279s00013246.1 | _ |
| Codonopsis lanceolata | Cl_chr05_03200T | _ |
| Arachis hypogaea L. | AH10G27610.1 | Pescadillo homolog like |