Gene detail

Detail information of Am08G005400.1 Annotation

Gene ID	Annotation
Am08G005400.1	Leucine-rich repeat protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am08G005400.1	mRNA	Chr08	51637194	51639689	-

Sequences

CDS:

>Am08G005400.1
ATGGAGAGAATTTGCATCTGGGTGCTCATGGTGACTTCCCTTTTCCTTCTAAACAATATTAACATGATTAATTGTGTGGATGAAGAGGTGAAGAGAACACTAATACAATTCCTTACAAAACTCTCCTCCAATACATTGGTTTGGAAACCAGACTCTGATCCATGCAATGACAACTGGGAAGGTGTGTATTGTGATGATAATGAATTTGAAATAAAGAGATTGTATCTTAATAAGATGAATTTGTCTGGAACTCTTGATGTTGCAATGATTTGTAACTCGCAGCCCCTCGCGGCAGCTCTCACGTTTCTCACTCTTGACGACAACAACATCAGTGGCGTGATATCATCAGAGATTGGAAACTGCAGACAACTCACTCGTCTTCACCTCGGACGAAACCAACTTGTTGGAAATATCCCCGCTTCACTTGCCACGTTAAATAGTTTGAAGCGGCTCGATATTTCAAACAACAAGTTTTCAGGGCCGTTGCCGGATTTGTCCAGAATCTCAGGACTCAATATGTTGCTAGCACAAAATAATAACCTTAGTGGAGATATACCTGTTTTTGATTTCTCCAATTTTGACCAGTTCAATGTCTCATTTAACAATTTAACTGGAGAAATTCCTGCTGGTCATGTCTTTGCAGACAGCTTCCTTGGTAATCCAGGACTATGTGGTGTTCCACTAAACAAAAATTGTTCTAGTCAGACTCTGAATGCTACTGGTAGTGCTAGTGAGAATGAGACATCATCATCAAAAGAATCAAATTCTAATTCTACAGACCAGATTCTTATGTACTCTGGCTATGCTGTATTAGGTGGTGTGGTAATCATTTTAGTAGCTTTGAAGCTGTGTAAAAGCAGAAACAAGATAGGGAAGAAAATTGAAGCAACTGATGGTGGAAAATCCATACAAAGCAGCTATGTTTCAAGTGAATACAAAGCAGCAGAGGGTTTTAGGTCCGCCACAGACAGCAAGAAATCTGAGTTTTCAGAAAGCGGGATGGTGTCAATGTCGCAATCGCAATCGCAATCGCAATCGCAATCACAATCACAACTAGTAGTCCTTTCAAGGCCAGAGGTAAATGAATTGAAGTTGGAAGAGTTGCTGAGAGCCCCAGCTGAGTTGATTGGGAGAGGAGAGAAAGCAAGTCTTTATAAGGTGATGCTTACTAATGGGATAACGGTTGTTGTAAAAAGGATAAAGGATTGGAGTATTTCCAGTCTTCACTTCAACCAAAGAATGCAACTATTGAGTCAAGCAAAACACCCTCATCTTCTCTCACCTCTTGCTTTCTATGCTTCCAAACAAGAGAAGCTTCTGGTCTATCAATATCAGCACAATGGAAGTTTATTCAAGCTTCTACATGGAAGTTCAAAAACCTATGACTGGACCAGCAGACTTGGAACTGCAGCTACAATTGCAGAGGCATTAGCTTTCATGCATCAAGAGCTTGGCCAACATGGTATTATTCATGGTAATCTGAAATCCTCCAACATTTTGCTAAACAATAACATGGAGCCATGTATAAGTGAGTATGGTGCTATGAGTAAAGATGATGATATGCAAAAAACACCTACTGCTAGTGATACTGATGTCTTCAAAGGAGATGTCTATGGCTTTGGTGTTATTCTTCTTGAACTACTTACTGGCAAATTAGTAAAGAATAATGGGATTGACATAACTGATTGGGTTCAATCAGTTGTAAGGGAAGAATGGACAGGTGAAGTATTTGATAGGTCTCTATTGTCAGAGTATGCAAGTGAGGAGAGAATGGTCAATTTGCTTCAGGTTGCTATAAGATGTGTCAATAGTTCCCCAGAGGTTAGGCCAAGTATGAACCAAGTGCTTCTCATGATTAACACCATCAGAGATGATGAGGAAAAATCCTTGATTTACCAAGTTTGA

Protein:

Promoter(3k):

>AM08G005400.1
CTCAGAGGCTTCCTTGGTTTAGCTGGGTATTACAGGAGATTTGTCAAGGACTTTGGCAAGATTGCCAAATCCCTAACAGACTTATTGAAAAAAGATAACTTTGAATGGAATGAAATTGCTGCCATAGCATTCCAGCAGTTGAAGAATGCACTTGTTTCTGCTCTTGTTTTAACTCTTCCAGACTTTTCAAAGACATTTATCCTTGAAACTGATGCTTCTGGGCGTGGGATAGGAGCTGTACTCATGCAGGAACACCATCTAGTAGCTTACATCATTAAGGCTTTAGGGTCTAGACAACAGGAACTTTCAATTTATGAGAAGGAGTTGTTGGCTATTGTATATGCAGTTCAGAAATGGAGCACATACTTGGCTCACAAACACTTTGTGATTAGAACTGATCAAAGAAATATCAAATATATACTTGAACAGAAATTGAATACTCCATTTCAGCAGGCTTGGGTTGCAAAATTAATGGGGTTTGAATTTGAAATTCAGTATAAGGAAGGTAGAGAAAATAGAGCAGCTGATGCTTTATCTCGTATTGAAGGAGCAGAAATTTTAGCACTCACTCTCAACAACACAGAGCCTGATTTGTTTCTGAAAATCAAAGACTCTTGGTCTAAGGATGCTAGTGTCTCTAAACTCATTGATGAACTGAAGGAAGACCTTACTTCCCACCCTAAGTTTGTGTGGAAGGATGACATTCTTAGAAGAAAGGGTAAGCTAGTGGTGGGCAATGACTCTGCCACCAGAAGCTTCATATTACACTGGTTCCATGACTCTGCTACAGGTGGACACTCTGGCCGTGACACACTACTGCTAGAATCAAGGCTCTCTTCTTTTGGAGGTGCATGACTAGAGACATACAGAAATATGTGCGTGAATGTCTTGTTTGTCAAAGAAACAAGGGTGAACAGGTTGCTTCCCCGGGTCTTCTTCAACCACTCCCTATTCCTGGACGAATTTGGGAAGCTATAAGTACGGACTTTGTGGAGGGCTTGCCAAAATCCAATGGTAAGCAAGTCATATTTGTTGTGGTAGATAGACTTAGTAAAAATGCACATTTTCTGGCTTTAGCTCACCCATATACGGCTGTTGATGTGGCTAAGTTGTTTATGGACTCTATATTCAAACTTCATGGTATGCCTACGACCATTGTTAGTGATAGAGATCCAATATTTTTGAGTGAAGTATGGAAGGAATTTTTCTCTCTGCAAGGGGTGGCTTTACACAAATCTAGTGCCTATCATCCCCAAACGGATGGGCAAACTGAGATTGTGAATAAAGCTCTTGAAACTTATTTAAGATGCATGTGCTGTGAAGAAGCATCTACTTGGGCTCAGTGGCTTCCATTGGCTGAATGGTGGTACAACACGAATTTTCATTCCTCAATACAATCCACACCATATGAGGTGGTGTATGGTCAACCTCCCCCACTACATTTACCTTATCTGCCTGGAGAGTCCTCCAATTTGATTGTTGACAGATCTTTGGTTGCTAGAGAGGAAGCAATTCGCTTGCTGAAATTTCACTTGGAGCGTGCTCTGAACCGTATGGCACAGCATGCGAACAAACACAGAGGTGATAGGCAATTCTCCATTGGGGACTATGTTTTTTTGAAGTTACAACCATATAGGCAGTTCAGTCTCAGAAATCAATCCTTCCACAAGCTAAATCCCAAGTATTATGGTCCCTACAAGGTACTTGATCGTGTTGGTGTTGTTGCTTACCAATTGGAGTTGCCTGCTACTGCTGGAATTCATAATGTAAACCATGGGGTAAAGTGCTCCCGGGGTCCCTTATCTTTATTTAAAGTAACGATTTGGTCCTTTATCTTTTTTTTGTCCCAAATCAGACCTTTATGTTTTAAATTTTTGACACATAAATCTTTTTTTGTCTCAAATCAGTCCTTTATGTTTCAAATTATTAACACATAAATCAGCACTGTTAACGGAAAAGGATTTATGTGTCAAAAATTTGAAAGATAAAGGACTTATTTGGGACAAAAAAAAACATAAAAGACTAATTCGTTACTTTAAATAAAGATAAGGGACCCCGGGAGCACTTTAGCCGTAAACCATGTTTCTCAGCTAAAACTTTGTAAGGATCCTGCTGCTTCTGTGATACAACACCCTTCGGTTTCTGTGATTGCTCCAAATAAGGGTGAACGTGAGGAAATTCTGGCAAGGAAGATGGTGAATAGGGGCAATGTTGCTGCCACTAAAGTGCTGGTCAAGTGGAAGAATCTCCCTTTGGATGCTGCCACATGGGAATTCTACTATGATATTTTAAGAGATTATCCTCATATTGTACTACACTTGGGTAGTTGGTCATTTTCCCTTTTTATTCTAGAAGAATGTACAAGCTACAGCTGTACTAGAGTATCCAATGATAGATTGTACTTATATTCCCTGAAATCAATGCAACAGGACTCATCTTTGCACAATCAATATTCCTTTTCTGCAATTGGTTACATTTATACTTGCCTCTTCTTCCAAGCTCCATTCAGTACATTGGGGCTTCTAGGTTGAGCAATTGATTGTTCCGGAGCTCCCTCCCTTACAATCCAAACGGTGACAGGCATGTAATCTGTTAGGGCTTAGCCCTTTTTTAATGAAACCGGTTCCCAATTGTTAAAAAAAAGATTATGTATATAATTCGTCATTATCCTGTTATCGTAATATGCAATTCCTGGCCAAATGAAAGAAATCAAGGAGGTGATGACATTACTACTAAATCCACCTGCCGGCCTATATTATTTGTCAAGTAGATATGACTTTATGATTATTAATTTTGTATGACTTATGATTATTAATTTTTTATTAATGGTTATGACGCCAACTAGATATGAAATCATATATTCATTGTAATGTCAGCCAATTAGACCAGTTCCATTTCCGGCAAATTCTGTTAAAGTTGACAAATGTATCCTATTCATATTCATAAGCCACTTCATATTACTACACTACTGATTTCTAGTAACACACATAGCTGAATCAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	374	616	3.10E-21
PF07714.20	PK_Tyr_Ser-Thr	375	616	7.30E-21
PF13855.9	LRR_8	100	158	4.50E-09

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.9.3:RLK-Pelle_LRR-III

Gene Ontology

GO term	Description	Category
GO:0004672	protein kinase activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR011009	Protein kinase-like domain superfamily
IPR000719	Protein kinase domain
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat

trEMBL

trEMBL term	Description
A0A1S3DYF1	_

SwissProt

SwissProt term	Description
Y2267_ARATH	Probable inactive receptor kinase At2g26730

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G26730	Leucine-rich repeat protein kinase family protein
Medicago sativa L.	MsG0280007236.01.T01	_
Oryza sativa L.	LOC_Os09g20970.1	receptor kinase, putative, expressed
Cucumis sativus L.	Csa010794	_
Glycyrrhiza uralensis Fisch.	Glyur001193s00034836.1	_
Codonopsis lanceolata	Cl_chr02_18920T	_
Arachis hypogaea L.	AH16G32860.1	Probable inactive receptor kinase At2g26730 like

Expression pattern