Detail information of Am08G005350.1 Annotation
Gene IDAnnotation
Am08G005350.1 5'-3' exonuclease family protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am08G005350.1mRNAChr085087736050890487+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF00752.20XPG_N1971.30E-29
PF00867.21XPG_I102711082.50E-27
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0005634nucleusCellular Component
GO:0004518nuclease activityMolecular Function
GO:0046872metal ion bindingMolecular Function
GO:0140097catalytic activity, acting on DNAMolecular Function
GO:0016740transferase activityMolecular Function

InterPro
InterPro termDescription
IPR006086XPG-I domain
IPR001044XPG/Rad2 endonuclease, eukaryotes
IPR006084XPG/Rad2 endonuclease
IPR006085XPG, N-terminal
IPR019974XPG conserved site
IPR029060PIN-like domain superfamily
IPR025527HUWE1/REV1, ubiquitin-binding motif
IPR008918Helix-hairpin-helix motif, class 2
IPR0362795'-3' exonuclease, C-terminal domain superfamily

trEMBL
trEMBL termDescription
A0A1S2Z4A0 _

SwissProt
SwissProt termDescription
UVH3_ARATHDNA repair protein UVH3

KEGG
KODescriptionEnzyme
K10846DNA excision repair protein ERCC-5

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT3G28030 5'-3' exonuclease family protein
Medicago sativa L.MsG0780037630.01.T01 _
Oryza sativa L.LOC_Os03g10780.1flap endonuclease, putative, expressed
Cucumis sativus L.Csa009119 _
Glycyrrhiza uralensis Fisch.Glyur001252s00030508.1 _
Codonopsis lanceolataCl_chr05_05480T _
Arachis hypogaea L.AH06G26360.3DNA repair protein UVH3 like

Expression pattern