| Gene ID | Annotation |
|---|---|
| Am08G005010.1 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am08G005010.1 | mRNA | Chr08 | 45970340 | 45981213 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF17919.4 | RT_RNaseH_2 | 1513 | 1610 | 1.20E-23 |
| PF00078.30 | RVT_1 | 1290 | 1449 | 3.70E-23 |
| PF13456.9 | RVT_3 | 1708 | 1818 | 5.00E-23 |
| PF17917.4 | RT_RNaseH | 1541 | 1643 | 5.80E-22 |
| PF00665.29 | rve | 1986 | 2083 | 2.50E-13 |
| PF03732.20 | Retrotrans_gag | 414 | 504 | 3.30E-13 |
| PF17921.4 | Integrase_H2C2 | 1912 | 1967 | 8.60E-08 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0015074 | DNA integration | Biological Process |
| GO:0005634 | nucleus | Cellular Component |
| GO:0006310 | DNA recombination | Biological Process |
| GO:0046872 | metal ion binding | Molecular Function |
| GO:0003676 | nucleic acid binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR012337 | Ribonuclease H-like superfamily |
| IPR036397 | Ribonuclease H superfamily |
| IPR002156 | Ribonuclease H domain |
| IPR041577 | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain |
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR000477 | Reverse transcriptase domain |
| IPR005162 | Retrotransposon gag domain |
| IPR001584 | Integrase, catalytic core |
| IPR041588 | Integrase zinc-binding domain |
| IPR000467 | G-patch domain |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR021109 | Aspartic peptidase domain superfamily |
| IPR002110 | Ankyrin repeat |
| trEMBL term | Description |
|---|---|
| A0A3Q7XW12 | _ |
| SwissProt term | Description |
|---|---|
| POL3_DROME | Retrovirus-related Pol polyprotein from transposon 17.6 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G01410 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
| Medicago sativa L. | MsG0680033048.01.T01 | _ |
| Oryza sativa L. | ChrSy.fgenesh.mRNA.22 | expressed protein |
| Cucumis sativus L. | Csa019435 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur001275s00037836.1 | _ |
| Codonopsis lanceolata | Cl_chr06_24620T | _ |
| Arachis hypogaea L. | AH13G57080.1 | Transposon Tf2-9 polyprotein like |